Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g0441 | ATGGCTGCATCAGAATTAGGATACATGGATCATAATTCAAGAGATGAAAATAATGAAGGCCAAGCGCATTTAGAGTTACCATTATTTGACTTGGATACATTATTGAATGCCACCAATAACTTTTCTAGTTACAATAAGCTTGGAGAGGGTGGTTTTGGACCTGTCTATAAGGGAATATTGCAAGAGGGACAAGAAATTGCAGTGAAGATGATGTCAAAAACTTCTAGACAAGGATTAAAAGAGTTCAAAAATGAAGTTGAATCCATTGCAAAACTTCAACACCGAAATCTTGTAAAGCTTCTTGGATGCTGCATTCATGGCAGAGAAAGAATGCTAATTTATGAATACATGCCCAACAAAAGCTTGGACTTGTTCATTTTTGATCAAATGCAAAGCGTGGTACTAGATTGGCCTAAGCGCTTCCTCATTATCAATGGGATTGCTCGAGGCCTTCTTTATCTTCATCAAGATTCCAGACTCAGGATAATCCATAGAGATCTAAAAGCAGACAATATTTTGCTAGATGAGGAGATGACTCCAAAAATTTCAGATTTTGGTATGGCTAGAAGTTTTAGAGGAAACGAAACTGAAGCAAATACAAAAAGAGTGGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATTGATGGACTATACTCAACAAAGTCGGATGTTTTTAGCTTTGGTGTTTTGGTGCTAGAGATTGTGAGTGGGAAGAGAAACAGAGGATTTTCTCACCCAGACCACTCCTTTAACCTTCTTGGGCATGCATGGACATTGTACATGGAAGGCAGGTCTATGGAGCTGATTGATACATCAGTTGGGGACATGCATGATCTATCACAAGTGTTACGTTCGATCAATGTGGGACTCTTATGCGTACAGTGTAGTCTAGATGATAGACCAAGCATGTATTCGGTGGTTCTGATGTTGAGTAGCGACGGTGCACTTCCTCAGCCTAAAGAGCCTGGTTTTTTCACTGGAAGGGAAGCAAAGTCCTCCTCAGGCAATCAGGGGCCATCTTCAGGCAATGGGGTCACCATTACAATGTTAGATGGTCGATAG | 1068 | 0.4026 | MAASELGYMDHNSRDENNEGQAHLELPLFDLDTLLNATNNFSSYNKLGEGGFGPVYKGILQEGQEIAVKMMSKTSRQGLKEFKNEVESIAKLQHRNLVKLLGCCIHGRERMLIYEYMPNKSLDLFIFDQMQSVVLDWPKRFLIINGIARGLLYLHQDSRLRIIHRDLKADNILLDEEMTPKISDFGMARSFRGNETEANTKRVVGTYGYMSPEYAIDGLYSTKSDVFSFGVLVLEIVSGKRNRGFSHPDHSFNLLGHAWTLYMEGRSMELIDTSVGDMHDLSQVLRSINVGLLCVQCSLDDRPSMYSVVLMLSSDGALPQPKEPGFFTGREAKSSSGNQGPSSGNGVTITMLDGR* | 356 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g0441 | 355 | Pfam | Protein tyrosine and serine/threonine kinase | 44 | 242 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi19g0441 | 355 | CDD | STKc_IRAK | 47 | 312 | - | - | |
Vvi19g0441 | 355 | Gene3D | Phosphorylase Kinase; domain 1 | 6 | 116 | - | - | |
Vvi19g0441 | 355 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 14 | 355 | - | - | |
Vvi19g0441 | 355 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 117 | 320 | - | - | |
Vvi19g0441 | 355 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 162 | 174 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi19g0441 | 355 | ProSiteProfiles | Protein kinase domain profile. | 41 | 326 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi19g0441 | 355 | SMART | serkin_6 | 41 | 312 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi19g0441 | 355 | MobiDBLite | consensus disorder prediction | 331 | 349 | - | - | |
Vvi19g0441 | 355 | Gene3D | Transferase(Phosphotransferase) domain 1 | 117 | 318 | - | - | |
Vvi19g0441 | 355 | Pfam | Domain of unknown function (DUF3403) | 313 | 355 | IPR021820 | GO:0004674 | |
Vvi19g0441 | 355 | MobiDBLite | consensus disorder prediction | 322 | 355 | - | - | |
Vvi19g0441 | 355 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 312 | IPR011009 | - | |
Vvi19g0441 | 355 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 6 | 116 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi19g0441 | Vvi-Chr19 | 4900009 | 4902808 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi19g0441 | 29 | 354 | Receptor kinase-like Gene Family | AT4G23290 | 54.518 | 8.55e-122 | 365 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi19g0441 | PK_Tyr_Ser-Thr | 7.7e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g0441 | - | - | vvi:100247061 | 694.115 |