Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi19g0384 | ATGCCTAATAAAAGCTTGGATGCTTTTCTGTTTGATCCAAGTAAGCATGCCCAGCTTGATTGGCCAACTCAATTCGACATCATTGAGGGCATAGCACGCGGGCTTCTCTATCTTCACCATGATTCTCGTCTTCGAGTGATCCATCGAGATTTGAAGGAGCGCAACATTCTCCTGGACGAGGATATGAATCCAAGAATTTCAGATTTTGGGATGGCAAGAATATTTGGAGGGAAGCAAACTATAGCAAACACTAACAGGGTTGTTGGAACATATGGCTATATGTCCCCTGAGTATGCAATGGAAGGGATATTTTCAGAGAAGTCTGATGTATTCAGTTTTGGAGTCCTGCTATTAGAGATTGTGAGCAGTAGGAGGAACACTAGCTTTTATCAAAATGAACACTCCCTTAGCCTCATAACATATGCCTGGAATCTGTGGAAAGAAGGAAAGGGATTGGAGTTGATGGATTCAACACTATCGGAGTCATGTTCTCCGGAAGAAGTAATGAGATGCATTCATGTGGGCCTCTTATGTGTGCAGGAGCATGTGAATGACAGGCCATCCATGTCTAATGCGGTGTTTATGCTTGGAGGCGAAACCGCTAGACCTGTTCCAAAACAACCTGCATTCACCTTGGAAGGAAGCCCCAGGCAGTCTATTTATTTTCTACAAGTACTGGCACAACAGCAACAGCAAGCGGAAGATGCTCTGGTGCTTGATTAG | 723 | 0.4426 | MPNKSLDAFLFDPSKHAQLDWPTQFDIIEGIARGLLYLHHDSRLRVIHRDLKERNILLDEDMNPRISDFGMARIFGGKQTIANTNRVVGTYGYMSPEYAMEGIFSEKSDVFSFGVLLLEIVSSRRNTSFYQNEHSLSLITYAWNLWKEGKGLELMDSTLSESCSPEEVMRCIHVGLLCVQEHVNDRPSMSNAVFMLGGETARPVPKQPAFTLEGSPRQSIYFLQVLAQQQQQAEDALVLD* | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi19g0384 | 240 | ProSiteProfiles | Protein kinase domain profile. | 1 | 210 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi19g0384 | 240 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 204 | - | - | |
Vvi19g0384 | 240 | SMART | serkin_6 | 3 | 195 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi19g0384 | 240 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 1 | 215 | - | - | |
Vvi19g0384 | 240 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 207 | IPR011009 | - | |
Vvi19g0384 | 240 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 46 | 58 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi19g0384 | 240 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 192 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi19g0384 | 240 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 1 | 203 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi19g0384 | Vvi-Chr19 | 4226619 | 4228994 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi19g0384 | 3 | 216 | Receptor kinase-like Gene Family | AT4G23150 | 60.465 | 2.47e-91 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vvi19g0384 | PK_Tyr_Ser-Thr | 4.2e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi19g0384 | - | - | pda:103696826 | 313.538 |