Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0381 ATGAAGGAGATGAAGGAGTGCGAGCTGTGTAGCTTTCCGGCGAGGATGTTCTGCGAGTCGGATCAGGCGAGGCTGTGCTGGGACTGCGACGAGAAGGTTCATGGGGCCAACTTCCTAGTGGCCAGACACTCCAGGAGCCTCCTCTGCCACGCTTGTCAAGCTCCCACTCCCTGGAAAGCCTCCGGCACCCGCCTCGCCCCCACCGTCTCTGTCTGCGAAGCCTGCGTTCTCCGTTGCGACAAAGACCGACATCGGAGCTCCGGTGAAGACCGGGAGAGTGAAGGAGGTAATACCGATGACGAGGAGGATGATGATGATGACCACGATGACGATGATGAGAACGATGGCGATGAAGGTGATGAAGATGATGATGTTGAAGAAGAGGAAGATGGAGAAAATCAAGTGGTTCCTTTGTCATCATCTGCGGCGTCTCTGCTTCTCCCTCCCGATGCCAGTTCTTCGAGCAGCGAAGATGGGGAGGCCTCGAGCAGGTTCTCTGCCAGAGGCCGCGGAGGTGTTTCGGCGCTGAAGAGGACGCGTCAGAATGCAGATCTTGATCTCGATTCCGATCAGGATGACATTGGCTGCTGCTCCTGGCAACACAACCACAAAGCTTCGAGAACAGCGTACGACGAAGAAGATACTTCTTTGAGCTCCCGGAGGCCATGTTACGAACGGCAACCTACAGAGCTGAACCGATCGCTAAAGCTCGAAGACCAAGGCGAAACAGAGTCAACATCGACGGCGATCGTAGGCTCGATCAAGAGGTTCCAGAAGAGCATTATCTCCGGCGACGAAGCGCCGGCCATGATTCTCGGAATCTGCAAGTTGAGCAAAGATCCCAGGGCCGTTGATCTTCGTCCTACCGCTAACCCGACAATTCCTTCCCGTACAGTTTGA 900 0.5544 MKEMKECELCSFPARMFCESDQARLCWDCDEKVHGANFLVARHSRSLLCHACQAPTPWKASGTRLAPTVSVCEACVLRCDKDRHRSSGEDRESEGGNTDDEEDDDDDHDDDDENDGDEGDEDDDVEEEEDGENQVVPLSSSAASLLLPPDASSSSSEDGEASSRFSARGRGGVSALKRTRQNADLDLDSDQDDIGCCSWQHNHKASRTAYDEEDTSLSSRRPCYERQPTELNRSLKLEDQGETESTSTAIVGSIKRFQKSIISGDEAPAMILGICKLSKDPRAVDLRPTANPTIPSRTV* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0381 299 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 215 - -
Vvi19g0381 299 MobiDBLite consensus disorder prediction 94 133 - -
Vvi19g0381 299 MobiDBLite consensus disorder prediction 84 175 - -
Vvi19g0381 299 MobiDBLite consensus disorder prediction 205 220 - -
Vvi19g0381 299 MobiDBLite consensus disorder prediction 134 162 - -
Vvi19g0381 299 CDD Bbox1_BBX-like 7 48 - -
Vvi19g0381 299 SMART bboxneu5 2 48 IPR000315 GO:0008270
Vvi19g0381 299 MobiDBLite consensus disorder prediction 203 245 - -
Vvi19g0381 299 ProSiteProfiles Zinc finger B-box type profile. 2 48 IPR000315 GO:0008270
Vvi19g0381 299 Pfam B-box zinc finger 3 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0381 Vvi-Chr19 4194626 4195896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0381 5 192 C2C2-CO-like Transcription Factor Family AT5G54470 47.872 2.52e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0381 - - vri:117909588 487.263