Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0379 ATGGCAACTGGGACCTCTATCTTCCTGTATAAATACCAAATCAACTCTACTTTTCTCTCTATACAAAACCCACAGGAAGCACTGGCCACTTCATTACTTCTCATGGCTTCTACAGAACCCACCATGCCCAACCGTTCTTCAACATCGCGGGCAAGAAAGACCGCTTCAGCGCAGAAGAAGCAGCCCCAGAGAGGAATGGGTGTGGCCCAGTTGGAGAGGTTGAGGGTAGAAGAGTGGAAGAAGATGACTGGGATCACCCATCTCCAACCAATGAGTCTTCCCGGTCATTTTCGGTATCAGATTCCCTACCAGTTTGCGGAGCCGCCTCCGGCGCCGGCCAGTGGTCCGGTGCAGCCGGGGTTGGGCTCGCCGGGGTGGGTTCCAAGGTTTGGGGGTGGTGGGTTTCATGGGTTTAGTGGCGGTGGTGGGTTCAGGGTGGTGGATCCGTACAGAAATGATGGAGCTGTGGGGGCTTTAACGGAGGCCTCGAGAGAGCTCTCTTCAATGCCAAAGATGGATTGTGTTTTTGATCGCTGTGATGTCTGCTTTAAGAAGAAGAGAATGAATGCTGACAATTTAGGGTTTAGTGGAGGAAGAGAGAAGTATGCAGAGACACCACCCATCAACAGCTTTGATTTTCTGGGATTGGACATGGCCAATGACGAGAACCGAGATTTAAGCCGTAGACGATCACCCATGACTGCTACTTACGCTTGTTACAACCACAGCGAGGATGCGGAGGTTGTTGCAGTTCATAGGAAGGGAAACTCTGTGAATGGAAGAATTTTTATGGAGTATGAGTTTTTTCCGGGGAAAGGAGAAGCTTCAACTTCAGTGGTTGGTGGTGGTGGTGAAGCTTCTCTTGCAATACCAACTGCTGAAGCTGCTACTACCACTAGTAGTAGGAATGCTTCTAATGTTGTTGATTTGTCCCTCAAGCTTTCATATTAG 951 0.4963 MATGTSIFLYKYQINSTFLSIQNPQEALATSLLLMASTEPTMPNRSSTSRARKTASAQKKQPQRGMGVAQLERLRVEEWKKMTGITHLQPMSLPGHFRYQIPYQFAEPPPAPASGPVQPGLGSPGWVPRFGGGGFHGFSGGGGFRVVDPYRNDGAVGALTEASRELSSMPKMDCVFDRCDVCFKKKRMNADNLGFSGGREKYAETPPINSFDFLGLDMANDENRDLSRRRSPMTATYACYNHSEDAEVVAVHRKGNSVNGRIFMEYEFFPGKGEASTSVVGGGGEASLAIPTAEAATTTSSRNASNVVDLSLKLSY* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0379 316 MobiDBLite consensus disorder prediction 39 63 - -
Vvi19g0379 316 Pfam Plant transcription factor NOZZLE 20 314 IPR014855 GO:0003700
Vvi19g0379 316 PANTHER OS01G0212500 PROTEIN 35 314 IPR040356 GO:0003700
Vvi19g0379 316 MobiDBLite consensus disorder prediction 39 67 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Vvi19g0379 NOZZLE 4.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0379 - - vvi:100262412 581.637