Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0351 ATGTTGATGGCAGCAACAGCAAGCTCCAGCACTGTCCTCAGACCAACCCCATTTCTGGGCCAAACCAGGGGAGCAAACTCTAACCCTCTTAGAGATGTTGTCCCTATGGGAACTGGGAAATACACCATGGGGAATGAGCTGTGGTATGGACCTGACAGAGTGAAGTATTTGGGACCCTTCTCAGCTCAGACTCCCTCGTACCTGACTGGAGAATTTCCAGGAGACTATGGATGGGACACCGCTGGATTGTCTGCTGATCCTGAGGCCTTTGCCAGGAACAGGGCTCTTGAGGTGATCCACGGGCGTTGGGCTATGCTTGGAGCACTGGGCTGCATCACCCCAGAAGTCCTTGAGAAGTGGCTTAGAGTGGACTTCAAAGAACCAATCTGGTTCAAAGCTGGAGCTCAAATCTTCTCCGAGGGCGGCCTGGACTACTTGGGCAACCCCAACCTTGTTCATGCCCAGAGCATTCTGGCAGTCCTCGGCTTCCAAGTTGTCCTCATGGGTCTTGTTGAGGGCTTCCGCATTAATGGCCTTCCTGGAGTTGGAGATGGCAACAACCTGTACCCTGGTGGACAATACTTCGATCCTCTTGGCCTCGCTGATGACCCGGTCACATTTGCTGAGCTCAAGGTCAAGGAAATCAAGAATGGACGGCTAGCCATGTTCTCCATGTTTGGCTTCTTTGTCCAAGCTATTGTGACCGGAAAAGGCCCCCTTGAGAACCTCTTGGACCACCTTGACAACCCAGTTGCTAATAACGCATGGGTCTACGCCACCAAGTTTGTGCCTGGATCTTAG 801 0.5268 MLMAATASSSTVLRPTPFLGQTRGANSNPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0351 266 Gene3D Chlorophyll a/b binding protein domain 55 259 - -
Vvi19g0351 266 FunFam Chlorophyll a-b binding protein, chloroplastic 55 259 - -
Vvi19g0351 266 SUPERFAMILY Chlorophyll a-b binding protein 47 263 - -
Vvi19g0351 266 Pfam Chlorophyll A-B binding protein 65 232 IPR022796 -
Vvi19g0351 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 15 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0351 Vvi-Chr19 3777470 3778862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0351 9 266 Chloroplast and Mitochondria Gene Families AT2G05070 67.041 2.21e-122 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0351 K08914 - vvi:100260599 551.206