Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0344 ATGAATTTGGTCATAAATCATCGCCACAGCAGTTATGGCACTCCTTTTTGCAAATTCTCAAGCCACAAACATGAGACTGGCAAATATAAGGTGCCCGTCAGAGTGCCTAAGAGGTCTGCCATGGCTGAGGATCTTACCCAAGATATTGTATCATTGTCAAAGACTGAAAAAAGTGGCAGCTTTCTAATTAAGACAGCTGCAACTTCCTCTGCATTTGCAGCAGCAAATTTTTTTGCAACAACAGACATGGCAAAGGCTGCAAATATAAAGGATATATTGGAAGGGGCTACTTCTGTTTATACTTTGGCCGATGGGAGCATTGGAGATTGGTTTGGAGGCTTCCTATATTCAGCTGGACAACAGGCTAATGCAGCTGTTCAGGACCAGTTGTCAGCTCTCAGTTTCACTAGTTTGGCAGTTATATTTGGGGCAGGTCTTGTAACCAGCCTTTCTCCTTGTACATTAAGTGTCTTACCACTGACCCTTGGTTACATTGGAGCATTTGGCTCGGGGAAAGGCAGAGCAGAGGTCATTGGGAATTCAGTTGCATTCTCTTTAGGATTGGCAACAACACTAGCAATCTTGGGTGTAGCAGCCTCATTCGCAGGAAAGGCATATGGACAGATAGGACAGGGACTACCTTTGGCTGCTTCTGGTTTGGCTGTTATTATGGGTCTTAATCTCCTTGAGATAATTGAACTACAACTTCCCTCATTTTTTAACAACTTTGACCCCCGTTCTGCTGCGGCTAATCTCCCTTCAAGTGTGCAAGCTTACTTGGCCGGGCTTACGTTTGCATTAGCTGCCTCACCTTGCAGTACGCCTGTGCTGGCTACTCTACTTGGATATGTTGCTACATCAAAGGATCCAGTGATTGGAGGCAGCTTACTTTTGACATACACGACTGGCTATGTTGCTCCTCTACTTCTTGCTGCTTCTTTTGCTGGAGCATTGCAGAGCCTGCTTTCGTTCCGCAAGTTCTCAGCATGGATTAACCCAACCAGTGGTGCACTTCTGCTAGGTGGGGGAATCTACACTCTCTTGGATAGGCTTTTCCCTACCTCAATGGTCATGTAG 1077 0.4568 MNLVINHRHSSYGTPFCKFSSHKHETGKYKVPVRVPKRSAMAEDLTQDIVSLSKTEKSGSFLIKTAATSSAFAAANFFATTDMAKAANIKDILEGATSVYTLADGSIGDWFGGFLYSAGQQANAAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKGRAEVIGNSVAFSLGLATTLAILGVAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPTSGALLLGGGIYTLLDRLFPTSMVM* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0344 358 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 132 356 - -
Vvi19g0344 358 Pfam Cytochrome C biogenesis protein transmembrane region 141 348 IPR003834 GO:0016020|GO:0017004
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0344 1 358 Chloroplast and Mitochondria Gene Families AT5G54290 72.652 6.79e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0344 - - vvi:100245228 674.085