Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0259 ATGGCTTCCTTGAAAAACGTTGGAGCTCTAACTCTCCTTCTTCTCCTCCTACTTTCATTGACAGTGCAAACTTCCGGCAAGGAAGATGCCAGCGGAGCGGGATCGAAATGTGGTGATCCCAAAGGAGGATCCGAGGAAAAGGCATCAGCCTTAAAGCTGAAGGTGATAGCAATATTCTCGATACTGATTGCTAGCATCTTGGGCATCTCTTTTCCCATACTTCTACAAGGCATGCCACTGCTTAAACCGGATGGAAAATTGTTCGTTTTGATTAAGGCATTCGCGTCGGGGGTTATCCTGGCCACAGGCTACGTTCACGTGCTGCCGGATTCAATTGAGAGCTTGACTTCTCCATGTCTGCCGCAGGCTCCATGGAGCAAATTCCCATTTTCAACGTTCATAGCCATGGTTGCAGCGGTTTTAACACTGATGATGGATTCTTTTGCAATGAGTTATTACAAGAAACATGGAATGAGTGGAGCAGAATGCGAATATGGGGATCACATAGAGAATGATCAGGGACATTCTCATGGACACGGACATGGAGTTGGTGTGAAGAAGCTTGATGACGAATCCTCAAAACTATTGAGATATCAAATTATCGCTCAGGTGCTAGAACTGGGAATTGTGGTCCACTCAGTGGTGATTGGGCTGTCAATGGGGGCCTCTGAAAATGCCAGTACAATCAGGCCCCTCATTGCTGCTCTTTGTTTCCATCAATTCTTTGAAGGAATGGGGCTTGGAGGATGCATTCTACAGGCTGAATACAAGGCAAGGACGAAGGCCATCATGGTGTTTTTCTTCTCGGTCACCACCCCCTTGGGGATCGCGCTGGGAATCGGCTTATCAAAGGTGTACAGCGACGACAGCCCGACGGCTCTGATAGTGGTTGGAGTGCTGAACGCTACATCTGCTGGGCTACTGAATTACATGGCGCTGGTGGACCTGCTGGGCGCTGATTTCATGGGCCCCAAATTGCAATCAAACATGAAGCTTCAAATGTGGGCTTATGTCGCTGTCATATTGGGCGTTGGTGGCATGTCCGTGATGGCAATATGGGCGTGA 1065 0.4854 MASLKNVGALTLLLLLLLSLTVQTSGKEDASGAGSKCGDPKGGSEEKASALKLKVIAIFSILIASILGISFPILLQGMPLLKPDGKLFVLIKAFASGVILATGYVHVLPDSIESLTSPCLPQAPWSKFPFSTFIAMVAAVLTLMMDSFAMSYYKKHGMSGAECEYGDHIENDQGHSHGHGHGVGVKKLDDESSKLLRYQIIAQVLELGIVVHSVVIGLSMGASENASTIRPLIAALCFHQFFEGMGLGGCILQAEYKARTKAIMVFFFSVTTPLGIALGIGLSKVYSDDSPTALIVVGVLNATSAGLLNYMALVDLLGADFMGPKLQSNMKLQMWAYVAVILGVGGMSVMAIWA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0259 354 PANTHER ZINC/IRON TRANSPORTER 50 351 - -
Vvi19g0259 354 Pfam ZIP Zinc transporter 52 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi19g0259 354 NCBIfam ZIP zinc/iron transport family 43 354 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0259 Vvi-Chr19 2760878 2762169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0259 12 354 Inorganic Solute Cotransporters AT4G19690 53.644 2.52e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0259 K14709 - vvi:100241788 659.833