Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0137 ATGTCTTTCCACAGATTCTACGCCTCATGGTTCGACCACCTGAACCACTTGGTGCACCAACTCACCCTCGCGCCCAAGCCCACCACCCCACAAGACAACCCAGCCCTGCTCCAACTGGTCCAGAAGGTCATTTCTCACTACTCCCAGTACTACAGAGCCAAGTCCGTCGCCGCCCAGAACGACGCCGTTTCACTCTTCGCGGCCCCATGGTCCTCCTCCCTCGAACGCTCCCTCCACTGGGTCGCCGGGTGGCGTCCCACCATCGTTTTTCACCTCATATACACCGAGACCAGCGCCCGCTTCGAGTCCCACATCGCCGACATCCTCCACGGCGTACGCACCGGCGACCTGGGCGACCTCTCCACCGCTCAGCTCCATCGGGTGAGCGAGTTGCAGTGCGAGACGGTGAGGGAGGAGAACGAGATCACGAGGGAGCTGGCCAAGTGGCAGGAGGGAGCAGTGGAGCTGGTGGAGGCAGGTGGGGATGGGAATGTGGAGGAGAAGATCGGAGGACTGATGAGTGTGTTGGTGAAGGCGGATGAGCTGCGGATGAGGACGATTTGGAGAGTGGCGGAGATGTTGACGCCGCAGCAGGCGGTGGAGTTCTTGATCGCGGCTGCCGAGTTGCAGTTTGGGGTTAGGGTTTTGGGGTTGAACCATGATAACCAACGTGAGAATGTATGA 684 0.6009 MSFHRFYASWFDHLNHLVHQLTLAPKPTTPQDNPALLQLVQKVISHYSQYYRAKSVAAQNDAVSLFAAPWSSSLERSLHWVAGWRPTIVFHLIYTETSARFESHIADILHGVRTGDLGDLSTAQLHRVSELQCETVREENEITRELAKWQEGAVELVEAGGDGNVEEKIGGLMSVLVKADELRMRTIWRVAEMLTPQQAVEFLIAAAELQFGVRVLGLNHDNQRENV* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0137 227 ProSiteProfiles DOG1 domain profile. 1 223 IPR025422 GO:0006351|GO:0043565
Vvi19g0137 227 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 2 225 - -
Vvi19g0137 227 Pfam Seed dormancy control 19 95 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0137 Vvi-Chr19 1520664 1521347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0137 2 217 Calmodulin-binding Proteins AT1G22070 26.201 2.54e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0137 - - vvi:100245234 457.988