Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0134 ATGGCTCGCGAGAACTTCGTCTACATAGCTAAGCTCGCTGAGCAAGCCGAGAGATACGATGAAATGGTGGATGCGATGAAGAAAGTGGCGAAGCTGGATGTGGATTTGACTGTGGAAGAGCGGAATTTGCTTTCGGTTGGGTACAAGAACGTGATCGGAGCGCGAAGGGCTTCCTGGAGGATCCTATCGTCGATCGAGCAGAAGGAGGAGGTGAGAGGGAATGAGCAGAACGCAAAGCGGATCAAGGAGTATAGGCAGAAGGTGGAATCTGAGCTGTCGGGTATTTGTAGCGATATTATGACTGTGATTGATGAGCATCTGATTCCGGCTTCTACGGCTGGTGAATCCACTGTTTTTTACTATAAAATGAAAGGGGATTATTATCGGTACCTGGCGGAGTTCAAGACCGGCAATGAGAGGAAAGAGGCGGCTGATCAGTCTCTTAAGGCATACCAGACGGCTTCTACTACTGCAGAGAGCGATTTATCCCCCACTCATCCCATCCGATTGGGTTTGGCTTTAAATTTTTCTGTCTTCTATTATGAGATTATGAATTCACCTGAAAGGGCTTGCCACCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCAGAGTTGGACACCCTTAGCGAGGAATCTTACAAAGACAGCACTTTAATTATGCAGCTCTTAAGGGATAACCTTACTTTGTGGACTTCTGACATCCCTGAGGATGGAGACCAGAAGATGGAAAGCTCTGCCAAAGCTGGTGGAGACGATGAGGGATAA 765 0.4719 MARENFVYIAKLAEQAERYDEMVDAMKKVAKLDVDLTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEVRGNEQNAKRIKEYRQKVESELSGICSDIMTVIDEHLIPASTAGESTVFYYKMKGDYYRYLAEFKTGNERKEAADQSLKAYQTASTTAESDLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGDQKMESSAKAGGDDEG* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0134 254 Pfam 14-3-3 protein 10 231 IPR023410 -
Vvi19g0134 254 Coils Coil 9 29 - -
Vvi19g0134 254 PIRSF 14-3-3 1 244 IPR000308 -
Vvi19g0134 254 PANTHER 14-3-3 PROTEIN 3 234 IPR000308 -
Vvi19g0134 254 MobiDBLite consensus disorder prediction 236 254 - -
Vvi19g0134 254 Gene3D - 1 245 IPR036815 -
Vvi19g0134 254 MobiDBLite consensus disorder prediction 233 254 - -
Vvi19g0134 254 SMART 1433_4 3 244 IPR023410 -
Vvi19g0134 254 FunFam 14-3-3 protein epsilon 1 244 - -
Vvi19g0134 254 ProSitePatterns 14-3-3 proteins signature 2. 213 232 IPR023409 -
Vvi19g0134 254 PRINTS 14-3-3 protein zeta signature 84 108 IPR000308 -
Vvi19g0134 254 PRINTS 14-3-3 protein zeta signature 150 176 IPR000308 -
Vvi19g0134 254 PRINTS 14-3-3 protein zeta signature 177 203 IPR000308 -
Vvi19g0134 254 PRINTS 14-3-3 protein zeta signature 35 64 IPR000308 -
Vvi19g0134 254 PRINTS 14-3-3 protein zeta signature 204 233 IPR000308 -
Vvi19g0134 254 PRINTS 14-3-3 protein zeta signature 115 137 IPR000308 -
Vvi19g0134 254 SUPERFAMILY 14-3-3 protein 2 233 IPR036815 -
Vvi19g0134 254 ProSitePatterns 14-3-3 proteins signature 1. 41 51 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0134 Vvi-Chr19 1489209 1493684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0134 3 252 14-3-3 family AT2G42590 80.000 2.12e-151 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0134 K06630 - vvi:100250345 493.041