Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0113 ATGTCTTTCGAGAGCTTCAATGAGGCCTGGTTCGACCACCTCCATGACCTCCTCCAGCAACTCAGGCTGGCACCCAAGGCCACAGCGCCGGACCGCGACCGAGCCCTCCTCGACCTCGTCCACAAGGTGCGGACCCACTACTCCCAGTACTACCGAGCCATGTCCTACACCGCCCGCCACGACGTCGTTTCGCTGTTCGCCGCCCCCTGGTCCTCCTCCCTGGAGCGCTCCCTCCACTGGGTCGCCGGGTGGCGCCCCACCATCGCCTTCCACCTCATCTACACCCACTCCAGCATCCTCTTCGAGACCCACATCGTCGACATCCTCCGCGGGGCTCACAACGGTGACCTCGGAGACCTCTCGCCGGCGCAGCTGCAGCGGGTGAGCGAGCTGCAGTGCCAGACGGTGGGGGAGGAGAACGAGATCACGGCGGAGCTCAGTGAGTGTTTCAACTCGGTCAGTGGGCTGGTGGGGGCGGTTTTTGACCCCGTGGAGAACGTGGAGCGGCTGAGGAATGTGGTGGAGAGGGCGGAGAATCTTCGGTTCCGGACCATTTGCAGCGTGGTGGAGATACTGAATCCGCAGCAGGCTGTGGAGTTTCTGGTTGCGGTTATGGAGTTGCAGTTCTGGGTCCGTGGGATGGGGTTGTGCCATGATCGCGTTCGTGAGAATTTGAGAGGGTTTCGAGGATTATAG 696 0.6221 MSFESFNEAWFDHLHDLLQQLRLAPKATAPDRDRALLDLVHKVRTHYSQYYRAMSYTARHDVVSLFAAPWSSSLERSLHWVAGWRPTIAFHLIYTHSSILFETHIVDILRGAHNGDLGDLSPAQLQRVSELQCQTVGEENEITAELSECFNSVSGLVGAVFDPVENVERLRNVVERAENLRFRTICSVVEILNPQQAVEFLVAVMELQFWVRGMGLCHDRVRENLRGFRGL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0113 231 Pfam Seed dormancy control 18 95 IPR025422 GO:0006351|GO:0043565
Vvi19g0113 231 ProSiteProfiles DOG1 domain profile. 1 221 IPR025422 GO:0006351|GO:0043565
Vvi19g0113 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 2 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0113 Vvi-Chr19 1343073 1343768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0113 1 204 bZIP Transcription Factor Family AT5G06950 22.549 3.82e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0113 - - vvi:100854900 442.965