Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g0076 ATGCACTGTACGTGTCTTCATGAATTGCGAAGTTTAAGGGTCCTATTCACGTTGAGACCAACAGACATTATAAGTTGTTCCAGTCTCAAGCACATGTTCACGCCCGAGTTGTATTTTGCAATGGAGTATGTGGAGCTATTGAAAGATATGTGGTCATCCATTTCTAATTACTTCAACTACCACAAAATTGTTAACGAGAATCTCACTACTCTAAGAGAGAAAAGGAAAAGACTCGAGTGTCGAGAAGAAGATATCAATACTGAGTTAGAAGATGCACAGTACAACCGTCGAAAGAAGGCGAAGAGAGAAGTTGAAAATTGGTTGATAGAAGTGCAAGTTGTAAAAGACGATGCACAACAGATAGAACAAAAAGCTGGAGAGAGAAGATATTTTTCAAGATTCAGTTTCCTAAGCCAATTTGAAGCGAATATGAAAAAGGTAGATGAGATTTTTGAGTTGGGGAATTTTCCTAATGGGATTTTAATTGATGTACATCAAGATGAAGGAAATGCATTGTTAACAGCACAGCTAATAGGTGAAACTACAGCCAAGAACATTTGGACATGCTTAGAGAAAGGTGAAATCCAAAGCATTGGAGTTTGGGGAATGGGAGGGATTGGCAAAACAACTGTCGTTACTCATATTCACAATCGGCTCTTGGAAAATAGGGACACTTTCGGCCATGTCTATTGGGTGACTGTATCAAAAGACTCCAGCATTCGTAGGTTGCAGGATGCTATTGCTGGAAAAATAAATTTAGATTTCTCAAAAGAGGAAGATGAAAAGATAAGAGCTGCTTTATTATCAGAAGCATTGCAGAAGAAAAAGAAATTTGTTCTTGTATTAGATGATGTATGGGAAGTTTATGTCCCACGGGAGGTTGGAATTCCAATTGGAGTTGATGGAGGAAAACTAATCATAACCACCAGATCAAGGGATGTGTGCCTAAGAATGGGATGCAAAGAAATTATCAAAATGGAACCACTTTCTAAGGTAGAAGCATGGGAGCTTTTCAACAAAACACTTGAGCGGTACAATGCACTGAGTCAAAAAGAAGAAGAAATAGCCAAGGATATTATCAAGGAATGTGGCGGTTTGCCTCTTGCCATTGTCACTACAGCTAGAAGTATGAGTGTTGTGTATAGCATTGCTGGATGGAGGAATGCATTGAATGAGTTGAGGGAACATGTTAAAGGGCACACAATCGACATGGAAAATGATGTATTTAAAATATTGGAATTCAGCTACAATCGCTTGAATAATGAAAAACTTCAAGAATGTTTATTATACTGTGCATTGTTTCCTGAAGATTATAAGATTAGGAGAGTGTCTTTGATCGGATACTGGATTGCTGAGGGGTTGGTAGAAGAAATGGGAAGTTGGCAAGCAGAGCGTGATAGAGGGCATGCTATATTGGACAAACTTGAAAATGTGTGTTTGTTGGAAAGATGTGAGAATGGAAAATATGTAAAGATGCATGATGTGATCAGGGACATGGCTATCAACATATCAACAAAGAATTCTCGATTCATGGTGAAAATCGTAAGAAATCTAGAAGATCTCCCAAGCGAGATAGAGTGGTCAAATAATAGTGTAGAAAGAGTTTCATTAATGCAAATTCGCAAGCTTTCAACTTTGATGTTCGTACCAAACTGGCCTAAGCTTTCCACCCTGTTTCTTCAAAATAACATGTATTCTTATCCATTTCGGCCTACTCTGGATAAAGGTCTTCCAAATTCCTTCTTTGTGCACATGCTGGGCCTTAGAGTTCTAGACCTGTCATACACAAACATTGCATTCCTACCAGATTCTATTTATGACAAAGTGAAACTTCGAGCTCTAATTCTTTGTTTTTGTCCAAAATTAAATCGGGTAGATTCATTGGCAAAGCTTAAAGAATTGAGAGAGTTGAATCTCTGTAGCAATGAAATGGAAACAATACCTGAAGGTATAGAGAAATTGGTCCACCTTAAACATTTTCATTGGTCCTCATCTCCCTACTGTTCCAATCCTCTTTCCAATCCTCTTTCCAATCTTTTTTCCAATCTTGTTCAACTGCAGTGTCTAAGACTTGATGATCGAAGACTTCCGGATGTAAGAGTGGAGGAGCTGAGTGGGTTGAGAAAGTTGGAGATCGTTGAAGTCAAGTTTTCCGGTCTACACAATTTCAATAGCTACATGAGAACAGAACACTATCGAAGACTTACTCACTATTGTGTTGGATTAAATGGATTTGGAACTTTTCGAGGAAAAAAAAATGAATTTTGTAAAGAAGTAATAGTGAAGTCATGTAATCTGGAAGGAGGAAAAGACAATGATGACTACCAGCTTGTGCTCCCTACCAATGTCCAGTTTTTCAAGATAGAAAAATGCCATCTTCCCACTGGCTTATTGGACGTTTCTCAATCCCTCAAGATGGCGACAGATTTAAAAGCATGTTTGATATCAAAATGCAAGGGGATAGAATACTTGTGGTCGGTAGAGGACTGCATTGCCTCATTAAACTGGTTGTTTCTTAAGGATTTGCCAAGCTTAAGGGTTCTCTTCAAATTGAGACCAATCGATATTGTACGTTGTTCCAGTCTCAAGCACTTGTACGTGAGTTACTGTGACAATCTCAAGCACTTGTTCACGCCTGAGTTAGTGAAGTACCACCTCAAAAACCTTCAAAGCATTGATGTCGGCAATTGCAGACAAATGGAGGATCTAATAGTAGCAGCAGAGGTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTCATTAATCAAAGGCATAATCTCATCCTCTATTTCCCCAACTTACAGAGTTTGACGTTGGAAAATCTACCAAAATTGAAGAGCATATGGAAGGGAACAATGACTTGTGATTCTCTACAACTTACAGTATGGAATTGCCCAGAGCTTAGAAGGCTTCCTCTTTCTGTGCAAATAAACGATGGTAGTGGAGAAAGACGAGCTTCAACACCGCCCCTCAAACAAATCAGAGGAGAAAAAGAGTGGTGGGATGGGTTGGAATGGAACACACCTCATGCCAAATCTATATTTGAACCCTTTACTACGTTTCAAACGGACGAGAATCCTTTTACGGTAGGAGGAGCTAATAAGCGGATTGAGAGTGGTTGTTGTGGTGCTGGACGGCGTCGTTTTGGTGGGATTTGTAGGGTTTGGAGGTGGAAACGGTGTCGCTTTGGGGGGTGGTGGGTGGTCGGAATGACGTCGGGGGCGAGGCTGCCGACATGGAAGGAGAGGGAGAACAACAAGAGGAGAGAGCGGCGGAGGAGGGCCATCGCGGCGAAGATTTTCGCCGGACTGAGAATGTACGGAAACTACAAGCTCCCCAAGCACTGCGACAACAACGAAGTCCTCAAAGCCCTTTGCAACGAGGCCGGATGGACCGTCGAGCCCGACGGCACCACCTACCGGAAGGGATGCAAGCCTGTTGAACGCATGGACATTGTGGGTGGATCCGCATCAGCAAGCCCGTGCTCATCTTATCACCCAAGCCCTTGTGCTTCCTACAACCCCAGCCCAGCCTCCTCTTCCTTCCCTAGCCCAGCTTCATCATCGTATGCTGCTAATCCCAATGCTGATGGCAATTCCCTCATACCATGGCTCAAAAATCTCTCATCTGCATCCTCATCAGCCTCTTCCTCCAAGCTTCCCCATCTATACATCCATAGTGGCTCCATCAGTGCTCCAGTTACTCCTCCATTGAGCTCTCCAACTGCTCGGACTCCCCGAATCAAAACCGACTGGGACGACCAATCAGCTCGCCCTGGATGGGCTGGAGCCCACTACTCCTTCCTGCCCTCTTCGACACCACCAAGCCCTGGCCGTCAGATCCTTCCTGATTCAGAATGGTTTGCTGGGATTCGAATCCCTCAAGGTGGGCCAACTTCTCCCACATTCAGCCTTGTCTCTTCAAACCCATTTGGCTTCAAGGAAGAAATGCTTGCCAGTGCCAGTGGTTCTCGCATGTGGACTCCAGGGCAAAGTGGAACATGCTCACCTGCAATTGCAGCAGGCTCTGATCATACTGCAGATGTTCCAATGTCTGAAGTAATTTCAGATGAGTTTGCATTTGGATGTAACACAGTGGGACTAGTGAAGCCATGGGAAGGAGAGAGGATCCATGAGGAGTGTGGCTCAGATGATCTAGAGCTCACTCTTGGGAGCTCGAGGACCAGGTACATTGACAGAGATATTTGA 4206 0.4294 MHCTCLHELRSLRVLFTLRPTDIISCSSLKHMFTPELYFAMEYVELLKDMWSSISNYFNYHKIVNENLTTLREKRKRLECREEDINTELEDAQYNRRKKAKREVENWLIEVQVVKDDAQQIEQKAGERRYFSRFSFLSQFEANMKKVDEIFELGNFPNGILIDVHQDEGNALLTAQLIGETTAKNIWTCLEKGEIQSIGVWGMGGIGKTTVVTHIHNRLLENRDTFGHVYWVTVSKDSSIRRLQDAIAGKINLDFSKEEDEKIRAALLSEALQKKKKFVLVLDDVWEVYVPREVGIPIGVDGGKLIITTRSRDVCLRMGCKEIIKMEPLSKVEAWELFNKTLERYNALSQKEEEIAKDIIKECGGLPLAIVTTARSMSVVYSIAGWRNALNELREHVKGHTIDMENDVFKILEFSYNRLNNEKLQECLLYCALFPEDYKIRRVSLIGYWIAEGLVEEMGSWQAERDRGHAILDKLENVCLLERCENGKYVKMHDVIRDMAINISTKNSRFMVKIVRNLEDLPSEIEWSNNSVERVSLMQIRKLSTLMFVPNWPKLSTLFLQNNMYSYPFRPTLDKGLPNSFFVHMLGLRVLDLSYTNIAFLPDSIYDKVKLRALILCFCPKLNRVDSLAKLKELRELNLCSNEMETIPEGIEKLVHLKHFHWSSSPYCSNPLSNPLSNLFSNLVQLQCLRLDDRRLPDVRVEELSGLRKLEIVEVKFSGLHNFNSYMRTEHYRRLTHYCVGLNGFGTFRGKKNEFCKEVIVKSCNLEGGKDNDDYQLVLPTNVQFFKIEKCHLPTGLLDVSQSLKMATDLKACLISKCKGIEYLWSVEDCIASLNWLFLKDLPSLRVLFKLRPIDIVRCSSLKHLYVSYCDNLKHLFTPELVKYHLKNLQSIDVGNCRQMEDLIVAAEVEEEEEEEEEVINQRHNLILYFPNLQSLTLENLPKLKSIWKGTMTCDSLQLTVWNCPELRRLPLSVQINDGSGERRASTPPLKQIRGEKEWWDGLEWNTPHAKSIFEPFTTFQTDENPFTVGGANKRIESGCCGAGRRRFGGICRVWRWKRCRFGGWWVVGMTSGARLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPVERMDIVGGSASASPCSSYHPSPCASYNPSPASSSFPSPASSSYAANPNADGNSLIPWLKNLSSASSSASSSKLPHLYIHSGSISAPVTPPLSSPTARTPRIKTDWDDQSARPGWAGAHYSFLPSSTPPSPGRQILPDSEWFAGIRIPQGGPTSPTFSLVSSNPFGFKEEMLASASGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGCNTVGLVKPWEGERIHEECGSDDLELTLGSSRTRYIDRDI* 1402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g0076 1401 PRINTS Disease resistance protein signature 884 900 - -
Vvi19g0076 1401 PRINTS Disease resistance protein signature 272 286 - -
Vvi19g0076 1401 PRINTS Disease resistance protein signature 363 377 - -
Vvi19g0076 1401 PRINTS Disease resistance protein signature 197 212 - -
Vvi19g0076 1401 Pfam BES1/BZR1 plant transcription factor, N-terminal 1073 1208 IPR008540 -
Vvi19g0076 1401 Gene3D Ribonuclease Inhibitor 502 768 IPR032675 -
Vvi19g0076 1401 Gene3D - 416 501 IPR036388 -
Vvi19g0076 1401 SUPERFAMILY L domain-like 485 902 - -
Vvi19g0076 1401 FunFam Probable disease resistance protein At1g63360 416 502 - -
Vvi19g0076 1401 MobiDBLite consensus disorder prediction 1233 1253 - -
Vvi19g0076 1401 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1070 1396 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vvi19g0076 1401 Gene3D Ribonuclease Inhibitor 853 978 IPR032675 -
Vvi19g0076 1401 Pfam NB-ARC domain 181 417 IPR002182 GO:0043531
Vvi19g0076 1401 Gene3D - 328 415 IPR042197 -
Vvi19g0076 1401 Gene3D - 176 327 IPR027417 -
Vvi19g0076 1401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 431 IPR027417 -
Vvi19g0076 1401 FunFam Probable disease resistance protein At1g61300 167 322 - -
Vvi19g0076 1401 Coils Coil 897 917 - -
Vvi19g0076 1401 Coils Coil 97 124 - -
Vvi19g0076 1401 Coils Coil 61 95 - -
Vvi19g0076 1401 SMART LRR_typ_2 585 608 IPR003591 -
Vvi19g0076 1401 SMART LRR_typ_2 631 654 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g0076 Vvi-Chr19 898117 916258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi19g0076 1070 1395 BZR Transcription Factor Family AT1G78700 74.251 1.75e-136 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vvi19g0076 NB-ARC 9.5e-48 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi19g0076 - K13459 vvi:104877551 1768.05