Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2096 ATGGCCTCCCTCGCTGCCACCACCGCCGCCTCCTCCCTCGGCGTCTCCGAGATGCTCGGTAACCCTCTCAACTTCTCCGGCGCCTCCAGAACTGCTCCCTCCGCCTCCAGCCCCGCCACCTTTAAGACCGTCGCCCTCTTCTCCAAGAAGAAGGCTGCGCCAGCCAAGGCCAAGCCCGCCCCCGTTTCACCCGCCGACGAGGAGCTCGCCAAGTGGTACGGTCCGGACAGGAGGATTTTCTTGCCAGAGGGTCTGTTGGACAGATCAGAAATCCCTGCGTACTTGACCGGAGAGGTTCCCGGAGATTATGGTTATGATCCTTTTGGGCTCAGCAAGAAGCCAGAGGACTTCGCCAAATATCAAGCATATGAACTGATCCACGCCCGGTGGGCTATGCTCGGCGCAGCTGGCTTCATCATCCCTGAGGCCTTCAACAAATTCGGTGCCAACTGCGGCCCTGAAGCTGTGTGGTTCAAGACAGGAGCTTTACTCCTTGATGGGAACACACTGAATTACTTCGGAAAGAACATCCCCATTAACCTTATTTTTGCTGTCGTCGCTGAGGTTGTTCTTGTTGGTGGTGCTGAGTACTACAGAATAATCAATGGCTTGGATTTGGAGGACAAGCTTCACCCAGGTGGTCCTTTTGATCCTCTGGGGCTTGCAAATGACCCAGACCAGGCTGCACTGCTTAAGGTGAAGGAGATTAAGAATGGTAGACTGGCGATGTTTGCCATGCTTGGCTTCTTCATCCAAGCTTACGTTACAGGAGAAGGCCCTGTTGAGAACCTTGCAGCCCATCTGAGCGACCCATTCGGAAACAACTTGCTCACTGTTATCGCTGGAACTGCTGAAAGAGCTCCTACCCTGTAA 873 0.5452 MASLAATTAASSLGVSEMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPAPVSPADEELAKWYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2096 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 31 279 IPR001344 GO:0009765|GO:0016020
Vvi18g2096 290 FunFam Chlorophyll a-b binding protein, chloroplastic 79 290 - -
Vvi18g2096 290 Pfam Chlorophyll A-B binding protein 92 253 IPR022796 -
Vvi18g2096 290 SUPERFAMILY Chlorophyll a-b binding protein 71 281 - -
Vvi18g2096 290 Gene3D Chlorophyll a/b binding protein domain 79 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2096 Vvi-Chr18 29067779 29070064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g2096 11 290 Chloroplast and Mitochondria Gene Families AT4G10340 85.053 3.74e-157 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2096 K08916 - vvi:100246457 545.043