Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2059 ATGGATAGGCATCCTTGCTTACAGGCAATCCTGAACATGCTGATGATGGTCATCCATGAATCACTGCGGCTCTACCCACCAGTACAAGTGGTGTCGAGGGAGGCCATAACAGACACGAAATTTGGAGGCATCCATGTGCCAAAGTGGGGTGAAGGTATGGAGCCTGCTGGTGACACTGCACACAGAACCTGA 192 0.5156 MDRHPCLQAILNMLMMVIHESLRLYPPVQVVSREAITDTKFGGIHVPKWGEGMEPAGDTAHRT* 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2059 63 SUPERFAMILY Cytochrome P450 11 48 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2059 63 Gene3D Cytochrome P450 1 56 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2059 63 Pfam Cytochrome P450 11 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2059 Vvi-Chr18 28543000 28549108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g2059 11 48 Cytochrome P450 AT2G46960 50.000 3.32e-07 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2059 K24544 - vvi:100253312 63.929