Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2058 ATGAAGAGGACACCCAATATCCCCAAGGAAGCAGTAGGGAAGAGGAGAGTTGGGGTTTGGGAAATGGAGGCTTTTACAGTTAAGCTGTTTATATCTATAGCTTTGGTAGGTGTTCTTGGACTGTTCTTTCGCCTGTATAATGCCCTGGTGGTGAAGCCGAAGAAGCTGAGATCTATTCTGAGGAACCAAGGGATCAGTGGCCCGCCACCGTCTTTTCTGCTCGGTAACATAAGGGAGATCAAAGAGTCACAGTCCACGGCAGTGAAGGACTCCTGCACCGACACCCACAACTGTGCTGCTGCTCTATTCCCCTTTTTCGAGAAGTGGCGAAATAAATATGGTCAAGTGTTCATGTTTTCACTTGGTAACACACAAATATTACATGTGAATCAACCTGATATTGTTAAAGAAATTACTACATGCACATCCTTGGACTTTGGGAAGCCCTCATACCAACACAGAGAGCTCGGTCCTTTGCTCGGCCAGGGTATTCTAACCTCGAATGGAGCCGTCTGGGCTCATAATAGAAAAATCCTTGCTCCTGAATTGTACATGGATAAGGTCAAGGGAATGATAGGCCTAATTACCGAGTCGGTTGACACATTGTTGAAGACATGGAGGAGCATGATCGAGGCAGAGGGTGGAATTGCAGACATAAGAATCGACGAGCACATGAGAAGCTTCTCAGGAGATGTGATCTCAAGGGCTTGTTTTGGTAGCAGTTACACAAAAGGGGAAGAGATTTTCTTGAGGCTTAGAGCTCTCCAAGAGGCTATGTCCAAGAAAATTTTTTTGGATATTCCCGGAATGAGATATGTTCCCACCAAGCACAACAGAGATGTTTGGGAGCTAGAAAAGGATGTCCGGAATTTGATTCTAAAGGTGGTGAGCGGGAGAGAGGAGTTAGCTGCCCATGAAAAAGATCTACTGCAGATGGTCCTTGAGGGAGCTAAGAACAGCGACCTAAGCCAAGAAGCAATAGACAATTTCATTGTCGATAACTGCAAGAACATCTACTTGGCTGGCTATGAGACCACTGCAGTGTCTGCTGAGTGGTGCCTCATGCTCCTGGCTGCAAATCCAGATTGGCAGGCTCGGGTTCGCGAAGAAGTAGTCGAAATCTGTAAAGGTAGAACTCCAGATGCGGATATGATCCGCAAAATGAAACAGATGACGATGGTGATCCACGAGTCACTGAGACTCTACCCGCCAGTAGCGGTGGTGTCGAGGGAGGCCCTAGCGGACATGAAATTCGGAGGCATCCATGTGCCAAAGGGGGTGAATGTATGGAGCCTGGTGGTGACACTGCACACAGACCCTGAAAATTGGGGACCGGACGCGCTTAAGTTCAACCCTGAGAGGTTCGCAAACGGGATCACAGGTGCCTGCAAGCTCCCACACTTGTACATGCCGTTCGGGGTTGGTCCAAGGGTGTGCCTTGGCCAGAATTTGGCCATGGTTGAGCTCAAGATACTGATAAGTCTGATACTGTCCAATTTTTCATTCTCCCTTTCTCCTAATTATAAACACTCACCTGCACTCAGGCTGGTGATAGAGCCTGAGAATGGAGTCGATCTCTTGGTAAAGAAGTTGTGA 1596 0.4774 MKRTPNIPKEAVGKRRVGVWEMEAFTVKLFISIALVGVLGLFFRLYNALVVKPKKLRSILRNQGISGPPPSFLLGNIREIKESQSTAVKDSCTDTHNCAAALFPFFEKWRNKYGQVFMFSLGNTQILHVNQPDIVKEITTCTSLDFGKPSYQHRELGPLLGQGILTSNGAVWAHNRKILAPELYMDKVKGMIGLITESVDTLLKTWRSMIEAEGGIADIRIDEHMRSFSGDVISRACFGSSYTKGEEIFLRLRALQEAMSKKIFLDIPGMRYVPTKHNRDVWELEKDVRNLILKVVSGREELAAHEKDLLQMVLEGAKNSDLSQEAIDNFIVDNCKNIYLAGYETTAVSAEWCLMLLAANPDWQARVREEVVEICKGRTPDADMIRKMKQMTMVIHESLRLYPPVAVVSREALADMKFGGIHVPKGVNVWSLVVTLHTDPENWGPDALKFNPERFANGITGACKLPHLYMPFGVGPRVCLGQNLAMVELKILISLILSNFSFSLSPNYKHSPALRLVIEPENGVDLLVKKL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2058 531 Pfam Cytochrome P450 102 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Vvi18g2058 531 Gene3D Cytochrome P450 51 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS E-class P450 group I signature 228 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g2058 531 PANTHER CYTOCHROME P450 FAMILY MEMBER 45 523 - -
Vvi18g2058 531 SUPERFAMILY Cytochrome P450 97 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2058 Vvi-Chr18 28531644 28533656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g2058 134 524 Cytochrome P450 AT5G24900 47.395 3.90e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2058 K24544 - vvi:100253312 1050.43