Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2033 ATGTCCGGTACGTCCGGCAGCGAACTCCGTACCTCTCTGAAGCTTCCATGGAGGATCCGGTTCATCCTTGCCGCCTTGAACGCCATCTCTAATGCATCTATTCGCCGTAATGGCACCGTCAACCGCTGTCTCATGACACTTATTGACTTCAAAGTGCCCCCCTCCGACAAGCCAGTTAAAGGCGTTACCACCTCCGACAAGCCAGTTAAAGGCGTTACCACCTCCGACACCACAGTCGACCCCTCCCGGAACCTGTGGTTTCGCTACTTCCTTCCTCGTGGTACCACTTCCGGGGAAAATCTTCCGATCATCGTCTATTTCCACGGCGGCAGCCTCGTGTTCCTTTCCCCCAGCTCCAAGTCCTACGATGACCTCTGCCGCCGCCTCGCTGGAGAACTCCCCGCCACCGTCGTCTCCGTCAACTACCGTCTCGCTCCGGAGCACAAATTCCCCTCTCCGTACGAAGACGGCGTCGAAATCCTCAAATTCATTGACGAAAACCCCCCAGCCAACGCCGATCTAACACGCTGCTTCATCGTAGGCGACAGCGCCGGCGGCAACCTGGTCCACCACGTAACTGCAAGGGCCGGGGAGCACGACTTCCGAAACCTGAAAATCGCCGGAGCCATACTGATACAACCATTTTTCGGCGGAGAAGAGAGAACAGAATCCGAAATTCAGCTCGCTGGAACTCCGCTATGGTCCGTGGAGCGCACGGACTGGTGCTGGAAGGCGTTTCTGCCGGAGGGGTCTGACCGAGACCATCCGGCGGCGAACGTATTCGGGCCGAAATCGAGCGATATATCGGGGTTGAAGTTTCCGAAAAGTTTGGTGTTCATGGGAGGCTTTGATCCATTAAGAGACTGGCAGAAGAGGTATTGTGAAGGACTGAAAGGAAATGGAAAAGAAGTGAAGGTGGTTGATTATCCAAATGCCATTCACTCCTTTTATATCTTTCCTCAATTGCCTGAATCAACTCTATTTCTCACGGAGCTTCAAGATTTCATTTATTCTCAATAA 1020 0.5353 MSGTSGSELRTSLKLPWRIRFILAALNAISNASIRRNGTVNRCLMTLIDFKVPPSDKPVKGVTTSDKPVKGVTTSDTTVDPSRNLWFRYFLPRGTTSGENLPIIVYFHGGSLVFLSPSSKSYDDLCRRLAGELPATVVSVNYRLAPEHKFPSPYEDGVEILKFIDENPPANADLTRCFIVGDSAGGNLVHHVTARAGEHDFRNLKIAGAILIQPFFGGEERTESEIQLAGTPLWSVERTDWCWKAFLPEGSDRDHPAANVFGPKSSDISGLKFPKSLVFMGGFDPLRDWQKRYCEGLKGNGKEVKVVDYPNAIHSFYIFPQLPESTLFLTELQDFIYSQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2033 339 SUPERFAMILY alpha/beta-Hydrolases 66 336 IPR029058 -
Vvi18g2033 339 PANTHER ARYLACETAMIDE DEACETYLASE 70 319 - -
Vvi18g2033 339 Pfam alpha/beta hydrolase fold 104 317 IPR013094 GO:0016787
Vvi18g2033 339 Gene3D alpha/beta hydrolase 6 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2033 Vvi-Chr18 28183941 28184960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g2033 15 339 Carbohydrate Esterase AT3G05120 38.012 3.06e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2033 - - vvi:100255132 698.738