Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g2030 ATGCTAGATACCGCCGGCGGCCATGTCCGCGCATCGCCAGATCTTCCATGGAGGGTCCGCCTTTCGCTTGCCATTATAACCACCATCTCCGACGCCTGTCTCCGCCGTGACGGCACTGTCAACCGCCGTCTCTTGAGCTTCCTGGACCTCAAAATCTCTCCCTCTGACAAACCAGTGAACGGCGTCACCACCTCCGACACCACAGTCGACCCCTCCCGGAACCTCTGGTTCCGCCTCTTCCTCCCTGGAGAAGCCGCCTCCGCCGGCGAGAATCTTCCCGTCGTCGTCTACTTCCACGGCGGGGGGTTCGTGTTCCTCTCCGCCAACTCCAAGCCCATTGACGACTTCTGCCGCCGCCTCGCTCGCGAACTCCCCGCCGCTATCGTCTCCGTCGACAACCGCCTCGCGCCGGAGCATCGATGCCCCTCCCAGTACAACGACGGCTTCGACGTGCTCAAATTCATGGACGAGAATCCTCCACTGCACTCTGATCTAACCCGCTGCTTCATCGCCGGTGACAGCGCAGGCGGCAACCTCGCCCACCACGTGGCTGCAAGAGCCAGCGAGTTCAAATTCCGGAACTTGAAAATCCTCGGGCTGATACCGATACAGCCGTATTTCGGAGGAGAAGAGAGGACGGAATCCGAAATCCAACTCGCCGGATCTCCGATCGTGTCGGTGTGGCGTACAGACTGGTGTTGGAAGGCGTTTCTGCCGGAGGGTTCAGACCGAGACCATCCGGCGGCGAATGTGTTCGGGCCGAAATCGGGCGACATATCAGGGGTGAAATTCCCGAAAAGTTTGGTGTTTATCGGAGGATTTGATCCGTTAAAAGATTGGCAGAAGAGGTATTGTGAAGGAATGAAGAAAAATGGAAAAAAAGTGAAGGTGATTGAGTATCCAAATGCCATTCATTCCTTTTATGGGATTCCTCAATTGCCTGAATCACGCTTGTTTATCAAGGAGGTTAGAAATTTCATTTATTTTGAATAA 993 0.5539 MLDTAGGHVRASPDLPWRVRLSLAIITTISDACLRRDGTVNRRLLSFLDLKISPSDKPVNGVTTSDTTVDPSRNLWFRLFLPGEAASAGENLPVVVYFHGGGFVFLSANSKPIDDFCRRLARELPAAIVSVDNRLAPEHRCPSQYNDGFDVLKFMDENPPLHSDLTRCFIAGDSAGGNLAHHVAARASEFKFRNLKILGLIPIQPYFGGEERTESEIQLAGSPIVSVWRTDWCWKAFLPEGSDRDHPAANVFGPKSGDISGVKFPKSLVFIGGFDPLKDWQKRYCEGMKKNGKKVKVIEYPNAIHSFYGIPQLPESRLFIKEVRNFIYFE* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g2030 330 Gene3D alpha/beta hydrolase 7 329 IPR029058 -
Vvi18g2030 330 PANTHER ARYLACETAMIDE DEACETYLASE 33 309 - -
Vvi18g2030 330 Pfam alpha/beta hydrolase fold 95 308 IPR013094 GO:0016787
Vvi18g2030 330 SUPERFAMILY alpha/beta-Hydrolases 20 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g2030 Vvi-Chr18 28161873 28162865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g2030 34 328 Carbohydrate Esterase AT3G63010 41.214 7.19e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g2030 - - vvi:100267163 679.093