Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1998 ATGACTAAACTTAGACTTCTTAGAATTGATGACACTCAAATGCAATGTGAAGTACACATTCCTCATGACTTTAAATTTCATTTTGATGAGCTGAGGTGTCTTGTTTGGTGCCATTATCCTCTGAAATTATTGTCATCTGATTTTGAGTGTAAGAATCTTGTGTGCCTCAGCATGCCTAATAGCCACCTTACTCAGCTATGGGAAGGAAATAAGGTTTTTGAAAACTTAAAATATATGGATCTTAGTCACTCTCAATACCTGACGGAAACTCCAGATTTCTCAAGGGTCACCAATCTTAAGATGTTGATTCTGGATGGTTGTACACAGTTGTGTAAAATTCACCCGTCCCTTGGAGATTTGGACAAACTCGCTCGCTTGAGTTTGAAAAACTGCATAAACCTTGAGCATTTTCCAAGCATCGGTCAGTTGGTATCCCTTGAAGATCTCATTCTCTCTGGTTGCTCAAAGCTAGAGAAGTTTCCGGATATCTTTCAGCACATGCCCTGCTTATGGAAGCTCTGTTTAGATGGAACTGCTACAACAGAACTCCCTTCCTCAATTGGTTATGCCACTGAGCTTGTTAGATTGGGTTTAAAAAATTGCAGAAAGCTCCGGAGTCTTCCAAGCAGCATTGGTAAATTGACACTTCTTGAGACCCTTTCTCTTTCTGGCTGCTCGGATCTTGGAAAATGTGAAGTGAACTCAGGGAACTTAGACGCATTGCCAAGGACTTTGGATCAACTTTGTAGTCTTTGGAGGCTTGAGCTGCAAAATTGCAGGAGCCTACGAGCATTGCCAGCGCTTCCATCAAGCTTGGAAATTATAAATGCAAGTAATTGCGAATCACTGGAAGACATCTCCCCTCAAGCAGTTTTCTCACAATTTAGAAGTTGTATGTTTGGAAATTGCTTGAAACTAACCAAGTTTCAAAGTAGGATGGAGCGTGATTTACAGAGTATGGCAGCCCCTGTTGACCACGAGATACAACCTTCCACTTTTGAGGAACAAAACCCAGAAGTTCCTGTCCTATTCAGCACTGTTTTTCCTGGAAGTGGAATACCGGATTGGTTCGAGCATCGTAGCGAAGGGCATGAAATAAATATACAGGTATCTCAAAATTGGTATACTAGTAACTTTCTGGGTTTTGCTCTTTCTGCTGTTGTAGCGCCCGAGAAAGAGCCCCTTACAAGTGGTTGGAAAACCTACTGTGACTTGGGATGCGGTGCTCCTAATTCGAAATTGAAATCCAATGGCATATTTTCCTTCTCCATCGTTGATGATTCCACTGAACTTCTTGAACATATAACAATTGGGTCAGATCATTGGTGGCTGGCCTATGTACCATCATTTATCGGCTTCGCTCCTGAGAAATGGAGTTGCATTAAGTTTTCATTTCGTACAGACAGGGAGTCCTGCATTGTGAAGTGTTGCGGAGTTTGTCCTGTGTACACTAAAAGTAACAGTGATGACGAGTCTAAGAGTGATGGGGATTATTCCTACCGTGATGACGAGTCTAATAGTGATGGGGATTATTCCTACAGTGATGACGAGTATAAGAGTGATACGTATTATTCCTACAGTGATAACGAGTCTAATAGTGATGGGAATTATTCCTACAGTGATGACGAGTATAAGAGTGATACGTATTATTCCTAA 1656 0.4143 MTKLRLLRIDDTQMQCEVHIPHDFKFHFDELRCLVWCHYPLKLLSSDFECKNLVCLSMPNSHLTQLWEGNKVFENLKYMDLSHSQYLTETPDFSRVTNLKMLILDGCTQLCKIHPSLGDLDKLARLSLKNCINLEHFPSIGQLVSLEDLILSGCSKLEKFPDIFQHMPCLWKLCLDGTATTELPSSIGYATELVRLGLKNCRKLRSLPSSIGKLTLLETLSLSGCSDLGKCEVNSGNLDALPRTLDQLCSLWRLELQNCRSLRALPALPSSLEIINASNCESLEDISPQAVFSQFRSCMFGNCLKLTKFQSRMERDLQSMAAPVDHEIQPSTFEEQNPEVPVLFSTVFPGSGIPDWFEHRSEGHEINIQVSQNWYTSNFLGFALSAVVAPEKEPLTSGWKTYCDLGCGAPNSKLKSNGIFSFSIVDDSTELLEHITIGSDHWWLAYVPSFIGFAPEKWSCIKFSFRTDRESCIVKCCGVCPVYTKSNSDDESKSDGDYSYRDDESNSDGDYSYSDDEYKSDTYYSYSDNESNSDGNYSYSDDEYKSDTYYS* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1998 551 MobiDBLite consensus disorder prediction 488 523 - -
Vvi18g1998 551 Pfam Leucine Rich Repeat 52 71 IPR011713 -
Vvi18g1998 551 SUPERFAMILY L domain-like 3 308 - -
Vvi18g1998 551 Gene3D Ribonuclease Inhibitor 1 323 IPR032675 -
Vvi18g1998 551 MobiDBLite consensus disorder prediction 524 551 - -
Vvi18g1998 551 MobiDBLite consensus disorder prediction 486 551 - -
Vvi18g1998 551 Pfam C-JID domain 348 486 IPR045344 -
Vvi18g1998 551 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 8 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1998 Vvi-Chr18 27641256 27643249 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1998 1 277 WRKY Transcription Factor Family AT4G12020 39.373 8.70e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1998 - - vvi:100256757 619.772