Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1964 ATGTTCTCTGTGCAGTGCATTAACCACAATGTGGAGACTGTTCTAGATCTCTTAGATGATATGCCAAAGTTAGTTCGAGGAGACTTTGCTAGAGTTGTTCAAATATTTGCAAATCTAATAAGCAATTCTATCAAGTTTACAACATGTAAGTTCAGCTTTCCTATTACTAAATGCAAGCTCTAG 183 0.3552 MFSVQCINHNVETVLDLLDDMPKLVRGDFARVVQIFANLISNSIKFTTCKFSFPITKCKL* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1964 60 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 48 - -
Vvi18g1964 60 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2 48 IPR036890 -
Vvi18g1964 60 Gene3D - 1 57 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1964 Vvi-Chr18 27223834 27224168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1964 1 48 Histidine Kinase Gene Family AT2G17820 91.667 3.92e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1964 - - twl:120013616 92.4337