Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1952 ATGGCTAATGGATCTACTTCTATAGTTGATTTTGAGTCATCTCGAGAAAATGAGCTTCAAATCATTTGCTTTGATTCTTCAAAGAAGCAATTTAAGTTCGACCATGTGTTCAGGCCTGGGAGTGACCAAGAGGCTGTTTTTGCACAAACTTCACCAATTGTGACTTCCGTGCTGGATGGGTACAATGTCTGTATATTTGCCTATGGACAAACTGGAACTGGAAAGACCTTTACAATGGAAGGAACTCCAGAAAATAGGGGAGTCAACTACAGGACTCTGGAGGAGTTGTTCCGAATTTCAAGGGAGAGAAGCAACATAATAAATTATGAATTGTTTGTTAGCATGTTGGAGGTTTACAATAAGAAGATAAGGGACCTTTTGGTAGAAAAATCGAACCAGCCTCCTAAGAAGTAA 414 0.3961 MANGSTSIVDFESSRENELQIICFDSSKKQFKFDHVFRPGSDQEAVFAQTSPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPENRGVNYRTLEELFRISRERSNIINYELFVSMLEVYNKKIRDLLVEKSNQPPKK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1952 137 Gene3D Kinesin motor domain 1 137 IPR036961 -
Vvi18g1952 137 ProSiteProfiles Kinesin motor domain profile. 1 137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1952 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 133 IPR027417 -
Vvi18g1952 137 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 131 IPR027640 GO:0003777|GO:0007018
Vvi18g1952 137 SMART kinesin_4 2 133 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1952 137 Pfam Kinesin motor domain 17 133 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1952 Vvi-Chr18 27006644 27007161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1952 25 131 Calmodulin-binding Proteins AT5G65930 44.860 1.24e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1952 K10406 - vvi:104882740 276.174