Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1941 ATGGATCTCTTCTTATACCTAATTTACTTCATACTCTTCTCTGTATCTCTTAATGAACAAAGTACTCCCCCCAAAGTATTTCGGACCTCCTTGATGGGAGAGAACATGGCTGTGATGTGTGGGGCTTCAGGGAACAAGTTCCTATTCTCCAACGAGGACAAGCTTGTTACCTCATGGTGGCCAAACTTGATCAAGAAGATTTTGTACTTCCCTTCTCTTTTAAATGACGCCTCAACAAGAGATCTGACCAAACCTCACAGAGCTCTTCTTCAATTTCTCAAGCAGTATGTGGAGATCATGGATTTGATGGCACACAAGCACATAGACATGGACTGGGCTCCTAATAAAAAAGTCAAGGTTTATCTGCTTTCAAAGAAGTATACCTTTGCGTTGTCTTGTCGGTTGTTTCTAAAGATTGAAGATTCTGAATGGGTTGCTAGGATTTCCAATGACTTCGATCATATTATGGCAGGGTTCATTTCTTTGCCTATAGATATTCCTGGTACAACATTCAACCGTGCTATCAAAGCAAAAAACATCCTTCACAAAGAGCTCATAGAAATAATCAAAAAGAGAAAGAAGGAATTAACAGAGAAGAGAGATTTAGCAGCTCAAGATCTACTATCCCACATGCTACTTGTGCCAGATGAGAATGGTAAGGTTCTGAATGAAATGGAGATTAGTACTTACATTCTTGGTGTACTCTTAGCTAGCCATGAAACCACAAGCACTGCTATCACATTTGTCCTCAAGTATCTTTCAGAGTTTCCAGATGTCTATGATGCAGTCTTGAAAGAGCAAATGGAGATTGCAAAGTCCAAAGGTCCAGAAGAGTTTCTCAACTGGAATGACATTCAGAATATGAAGCATTCATGGAATGTGGCGAGGGAGTCAATGAGGCTATCACCACCGGGTATAGGAGGTTTCAGAGAAGCCTTAACTGACTTCACTTATGAAGGTTTTACAGTTCCAAAAGGATGGAAGACACATTGGACTGTGCATTCAACGCACAAGAATCCCGAGTACTTTCCAGATCCGGAAAAGTTTGATCCCTCAAGATTTGAAGGAGAGGGGCCTGTACCATACACTTTCGTACCTTTTGGGGGAGGACCTCATATGTGCCATGGGAAAGAGTATGCTCGACTAGAACTACTTGTGTTCATGTACAATGTGGTGTCAAGATTCAAATTGGAGAAAGTAGTTCCGAACGAAAAGATCACATATAACCCCTCACCCATTCCTGCAAATGGTCTCCCAATGCGCCTCCAGCCTCATAAAATGTAG 1284 0.4159 MDLFLYLIYFILFSVSLNEQSTPPKVFRTSLMGENMAVMCGASGNKFLFSNEDKLVTSWWPNLIKKILYFPSLLNDASTRDLTKPHRALLQFLKQYVEIMDLMAHKHIDMDWAPNKKVKVYLLSKKYTFALSCRLFLKIEDSEWVARISNDFDHIMAGFISLPIDIPGTTFNRAIKAKNILHKELIEIIKKRKKELTEKRDLAAQDLLSHMLLVPDENGKVLNEMEISTYILGVLLASHETTSTAITFVLKYLSEFPDVYDAVLKEQMEIAKSKGPEEFLNWNDIQNMKHSWNVARESMRLSPPGIGGFREALTDFTYEGFTVPKGWKTHWTVHSTHKNPEYFPDPEKFDPSRFEGEGPVPYTFVPFGGGPHMCHGKEYARLELLVFMYNVVSRFKLEKVVPNEKITYNPSPIPANGLPMRLQPHKM* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1941 427 Pfam Cytochrome P450 25 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 FunFam Taxadiene 5-alpha hydroxylase 17 425 - -
Vvi18g1941 427 Gene3D Cytochrome P450 12 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 PRINTS P450 superfamily signature 237 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 PRINTS P450 superfamily signature 293 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 PRINTS P450 superfamily signature 365 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 Coils Coil 186 206 - -
Vvi18g1941 427 PANTHER CYTOCHROME P450 26 22 410 - -
Vvi18g1941 427 PRINTS E-class P450 group I signature 364 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 PRINTS E-class P450 group I signature 332 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 PRINTS E-class P450 group I signature 374 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1941 427 CDD CYP90-like 25 424 - -
Vvi18g1941 427 SUPERFAMILY Cytochrome P450 24 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1941 Vvi-Chr18 26756577 26758590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1941 26 330 Cytochrome P450 AT5G36110 46.129 4.56e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1941 K20667 - vvi:100260260 538.11