Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1940 ATGGATCTCTTCTCCGCCTATCTGCCATACCTTGTAGCCTTCTGTTTGTCTCTTCCACTCATCATCTTTGTCTTTCTATACAAACCCTCCAACACAAAGCTCCCTCCTGGTAAAATGGGGTTGCCCATCATCGGGGAAAGTATTGAGTATGGCTTAGCAGCCGCAAGGGGAAACCCACAGGGATTCATAGCTGATAGAATGACCCAGTACTCCCCCGATGTGTTTCGGACCTCCTTGATGGGAGAGAACATGGCTGTGATGTGTGGTGCGGCAGGGAACAAGTTCCTGTTCTCCAACGAGAACAAGCTTGTCAAGTCATGGTGGCCACGCTCAGTCTATAAAGTTCTCTACTTCCCATCTCCTAACGACAAGGATTCTTCTGGCGCAGCAGACTTGATGATGAACATGAAGAGCTATCTCATCGAATTTGTCAAGCCAGATGCTCTGCAGCAGTACATACCAGTCATGGATTCCATGGCACGCGAACATATAGATATGGATTGGGCTCCTAACAGAGAAGTGAAGGTGTTTCAATTAGTTCAGAAGTACACCTTCGCATTGGCCTGTCGCCTGTTTATGTACATCCAAGGCGAGGAGAATATTGCCAAGATTGCTCACCCCTTCCATCTTATTGTTCAAGGGTTCATGTCTGTTCCAATAGATCTTCCCGGTACTGGATTCAATCGTGGTATCAAAGGAGGAAAAATGATCAGGGAAGAGATTGAAGCGGTCATCAAAAGGAGAAGAACGGAGTTGTTAGAGAAGGGAGTATCAAAAGTCCCTGATCTATTGTCTCGAATGCTCCTATCTCCAGATGAGAAAGGAAGGCATCTGAATGATATAGAGATTAACAGTTATATGGTTGGTTTACTCCTAGCCAGCCATGATACCACGAGTTCCGCAATAACTTTCACCCTGAAATATCTTGCACTGTTTCCTGATGTACATAATAAGGTCCTGAAAGAGCAAATGGAAATAGCACAGTCCAAAGGTCCAGGTGAGCTTCTGAATTGGAGTGACATCCAGAAGATGAAATATACTTGGTGTGTAGCAAGGGAATCAATGAGGCTTGCACCCCCTGCCCAAGGAGCTTTTAGAGAAGCCACAACTGACTTCACTTTTGCAGGTTTTACCATTCCAAAGGGATGGAAGACGCATTGGTGTGTACATTCAACACATAAGAACCCCAAATACTTTCCCAATCCTGAGAAATTTGATCCATCCAGATTTGAAGGAAAGGGCCCTGAGCCATACACTTTTGTACCTTTTGGGGGAGGACCTCGAATGTGCGTTGGCAAAGAATATGCTCGACTGGAAATACTTGTGTTTATCCACAATGTGGTGACCAAATTCAAGTTAGAGACTGTGCTTGAAAATGAAAAGATTTTGTTTGGTTTGTCAGCCCTTCCGGCAAAAGGTCTCCCAATTCGCCTCCAGCCTCATCAAAACTAG 1452 0.4511 MDLFSAYLPYLVAFCLSLPLIIFVFLYKPSNTKLPPGKMGLPIIGESIEYGLAAARGNPQGFIADRMTQYSPDVFRTSLMGENMAVMCGAAGNKFLFSNENKLVKSWWPRSVYKVLYFPSPNDKDSSGAADLMMNMKSYLIEFVKPDALQQYIPVMDSMAREHIDMDWAPNREVKVFQLVQKYTFALACRLFMYIQGEENIAKIAHPFHLIVQGFMSVPIDLPGTGFNRGIKGGKMIREEIEAVIKRRRTELLEKGVSKVPDLLSRMLLSPDEKGRHLNDIEINSYMVGLLLASHDTTSSAITFTLKYLALFPDVHNKVLKEQMEIAQSKGPGELLNWSDIQKMKYTWCVARESMRLAPPAQGAFREATTDFTFAGFTIPKGWKTHWCVHSTHKNPKYFPNPEKFDPSRFEGKGPEPYTFVPFGGGPRMCVGKEYARLEILVFIHNVVTKFKLETVLENEKILFGLSALPAKGLPIRLQPHQN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1940 483 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 SUPERFAMILY Cytochrome P450 26 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 FunFam Taxadiene 5-alpha hydroxylase 26 481 - -
Vvi18g1940 483 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 PANTHER CYTOCHROME P450 26 33 454 - -
Vvi18g1940 483 CDD CYP90-like 66 480 - -
Vvi18g1940 483 Gene3D Cytochrome P450 27 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 Pfam Cytochrome P450 35 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1940 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1940 Vvi-Chr18 26733761 26735477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1940 34 385 Cytochrome P450 AT5G36110 44.507 2.55e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1940 K20667 - vvi:100244714 989.178