Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1930 ATGGACAGATTTGAGGCAGAGTTTATTGAAGATATCATTGGTGAGATTAGAAGATTAATTCCTAAGTTGGTACATGTTGGTGAGAACATGGTTGGAATGGATGAAAATTTGAAAGAAGTGAAGTCATTGATAGATGCCCAATCAAATGAAGTGAGCATGGTTGGGATTTATGGGATTGGTAAAACTACCATCGCCAAGGTTGTTTACAATGATATGTTAGTTCAATTTAAACGTCACAACTTTCTTGAAAATGTGAGAGAGAAATCTAAAGATGATGATGTCGGAATCCCCCATGATATTAGGAACCTATCTTCCCTGCTAAGTTTATCCCTAAGTAACTGCAATCTAATGGAAGGAGAGATCCTCAACCATATTTGGCAGCTATCATCATTGGAAAAATTATCTCTGGATAGGAACCATTTTAGTAGCCTTCCTGCTGGCATCAGTCAACTTTCCAATCTAAAAGGCCTTAAGTTGAGTCACTGCAAGAACCTTCTACAAATTCCAGAGCTTCCATCAAGTGTACAATTTTTGGACGCACACTGGTCGGATGGTATTTCATCAAGGCCCTCAGTTCCGCCGATTCGTTCTCTGATCAATTGCTTCAAATCAGAACTAATTCCGGTTGGAGGCCAACTAGAAAAGCATTGA 651 0.3917 MDRFEAEFIEDIIGEIRRLIPKLVHVGENMVGMDENLKEVKSLIDAQSNEVSMVGIYGIGKTTIAKVVYNDMLVQFKRHNFLENVREKSKDDDVGIPHDIRNLSSLLSLSLSNCNLMEGEILNHIWQLSSLEKLSLDRNHFSSLPAGISQLSNLKGLKLSHCKNLLQIPELPSSVQFLDAHWSDGISSRPSVPPIRSLINCFKSELIPVGGQLEKH* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1930 216 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 90 IPR044974 GO:0006952
Vvi18g1930 216 Gene3D Ribonuclease Inhibitor 69 204 IPR032675 -
Vvi18g1930 216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 88 IPR027417 -
Vvi18g1930 216 SUPERFAMILY L domain-like 95 198 - -
Vvi18g1930 216 SMART LRR_typ_2 128 151 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1930 Vvi-Chr18 26566758 26572084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1930 2 77 WRKY Transcription Factor Family AT4G12020 35.443 1.42e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1930 - - vvi:104882743 157.918