Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1919 ATGGATCTCTTCTTCTCATATCTACTTTACCTTATAGTACTCTCCACTATATCTCTTGGCATAATCTTCCTTGCTTATCACCACAAATCTTCCAATTCAAAGCTTCCCCCTGGTAGAAAAGGCTGGCCCATCATCGGGGAAACAATGCAGTTTGCCTTAGCAGCTCAAAGGGGAAATCCAGAGAGGTTCATAAATGATAGAATGAACAAGTACTCCCCTGAAGTATTCCGGATCTCCTTGATGGAAGAGAACATGGCTGTGATGTGTGGTGCACCAGGGAACAAGTTTTTCTTCTCCAATGAGAATAAGCTTGTCACCTCGTGGTGGCACCGCTCCATGAAGAAGATTTTGTACTTCCCCTCGCTTTTTGATAACCCTGCAACACAAGATCAGATCAAAACTCCTAGCTTTCTTCCAGAATTTCTCAAGCCAGAAGCTCTGAAACACTATGTAGCCATCATGGATTTGATGGCAGGTATGCACATAGATATGGATTGGGCTCCTTATAGAGAAGTGAAGGTTTTTCCACTCGTAAAGAAGTATGCCTTCGCATTATCTTGCCGGTTGTTTATGAAGGTTGATGATCCTCAGTGTGTTGCCAGAATTTCTCATCCTTTCGAACTTATTATGGCTGGGTTCCTTTCTGTACCTTTAGATATTCCTGGTACAGCATTCAACCGGGCTATCAAAGCACGCAACATCGTCCACAAAGAGCTTCTAGCAATCATCAACAAGAGGAAAATGGAATTAGGACAGAAAGGAAACTCAGCAGCCAGAGACTTTCTGTCCCACATGCTTTTAGAAGCAAATAAGAATGGTGAGATTATGAGTGAAACGGAGATCAGTACTCACCTTATTTGTCTACTGCTGGCAACCCATGACAGCACAAGTGCGGTTATCACATTTGTTCTCAAGTATCTGGCAGAGTTTCCCAGTATCTATAATGAAGTCTTTAAAGAACAAATGGAGATCGCAAAGGGCAAGGGCTCAGAAGAATATCTGAACTGGGATGACATTCAAAAGATGAGATATTCTTGGAATGTGGCAAATGAAACAATGAGGCTAACGCCACCTGTTCAAGGAGCCTTTAGGGAAGTCATTAAAAACTTCACTTACGCAGGTTTTACTATGCCAAAGGGATGGAAGACACATTGGAACGTGAATACAACACACAGAAATCCCAAATACTTTCCAGATCATGAGAAATTTGATCCCTCAAGATTTGAAGGAAGAGGACCTGAACCATTCACTTTTGTACCCTTTGGGGGAGGACCTCGGATGTGCCCAGGAAGGGAATATGCTCGAGCTCAAGTACTTGTTTTCATACATAATATTGTGACGAAATTCAAATGGGAGAGAGTAGATCCAAACGAAAAGATTTCTTATAATCCGTCTCCCATTCCAGAAAAGGGCTTCCCTATTTGCCTCCAGCCTCTAGAAAATATATATTGA 1452 0.4215 MDLFFSYLLYLIVLSTISLGIIFLAYHHKSSNSKLPPGRKGWPIIGETMQFALAAQRGNPERFINDRMNKYSPEVFRISLMEENMAVMCGAPGNKFFFSNENKLVTSWWHRSMKKILYFPSLFDNPATQDQIKTPSFLPEFLKPEALKHYVAIMDLMAGMHIDMDWAPYREVKVFPLVKKYAFALSCRLFMKVDDPQCVARISHPFELIMAGFLSVPLDIPGTAFNRAIKARNIVHKELLAIINKRKMELGQKGNSAARDFLSHMLLEANKNGEIMSETEISTHLICLLLATHDSTSAVITFVLKYLAEFPSIYNEVFKEQMEIAKGKGSEEYLNWDDIQKMRYSWNVANETMRLTPPVQGAFREVIKNFTYAGFTMPKGWKTHWNVNTTHRNPKYFPDHEKFDPSRFEGRGPEPFTFVPFGGGPRMCPGREYARAQVLVFIHNIVTKFKWERVDPNEKISYNPSPIPEKGFPICLQPLENIY* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1919 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Vvi18g1919 483 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 SUPERFAMILY Cytochrome P450 26 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 Gene3D Cytochrome P450 25 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 Pfam Cytochrome P450 36 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1919 483 FunFam Taxadiene 5-alpha hydroxylase 26 479 - -
Vvi18g1919 483 PANTHER CYTOCHROME P450 26 33 466 - -
Vvi18g1919 483 CDD CYP90-like 67 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1919 Vvi-Chr18 26421154 26422968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1919 35 383 Cytochrome P450 AT5G36110 46.591 2.01e-104 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1919 K20667 - vvi:100260260 1001.12