Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1918 ATGGGATGGCCAATCATAGGAGAAACTTTGGAATTTGCTTTGTCTTGTCAAGGGGGGAACCCGGGGAGATTCTTGAACGATAGAATGAACAAGTACTCCCCTCAAGTGTTCAAGACCTCCTTATTGGAAGCGAACATGGCTGTGATGTGCGGCCCTTCGGGGAACAAGTTTCTTTTCTCCAACGAGGACAAACTTGTAGTCTCATGGTGGCAGCGTTCAATGAAGAAGATTTTGTGCTTCCCATCTGTCTTCAACGAAACTTTAACAGGAGATAAGTTCAGACCCCCTACCTTCCTTCCTGAATTTCTCAAGCCAGAAGCTCTGCAACACTACATAGCCACCATGGATTCGATGGCAAGCGAACACATTGAGTTGAATTGGTCTCCTAATAGAGAGGTACTGGTTTTTCCGCTTGCAAGGAAGTACAGCTTTGCGTTGGCTTTCCGGCTCTTTATGAGCATTGATGATCCTGAGTATGTTGAGATGATTTCTCATCCCTTCCAGATTTTGAACGAAGGATTCCTTTCTGTGCCTATAGATATTCCTGGGACGACATTCAACTGGGCTCTCAAAGCCAGCAAATTCATTCACAATGAGCTTCTAGCAATCATCAGAAAGCGAAAGATGGAGTTAGAGCAGAAGGGAGACTCAGCTGCTAGAGACCTACTGTCTCACATGCTCTTAGCATCAGATGAAAACTGTTATGTTAAGAGTGAGATGGAGATCAGTACTCAAGTTATTTGTCTGCTTTTTGCTACCCATCACACCACAAGTTCTGTCATCACATTCATCCTCAAGTACCTGGCCGAGTTCCCTGATGTCTATAGCAAAGTCTTAAAAGAGCAAAAGGAGATTGCAAAGAGCAAAGGTCCGGAAGGGTTTCTGAAGTGGGATGACATTCAAAAGATGAAATATACTTGGAATGTGGCAAATGAAACAATGAGGCTAACCCCACCTGTGCAAGGAACTTTTAGAGAAGCCATAACTGACATCACTTATGCAGGTTTTACAATTCCAAGGGGATGGAAGATGCATTGGAATGTAAATACAACACATAGAGATCCCAAGTATTTTCCTGATCCCGAGAAATTCAATCCCTCGAGGTTTGAAGGAAAAGGGCCTCAACCATTCACTTTTGTGCCTTTTGGGGGAGGGCCTCGGATGTGCCCCGGAAGGGAATATGCTCGAGCGCAGGTACTTGCATTCATACATCATGTGGTGACAAGATTCAAATGGGAGAAAGTAGATCCCTGTGAAAAGGTTGCATATAATCCATCACCCATTCCTTCTAAGGGCTTCCCAATTCGCCTCCAGCCTCTACAAAATGGATCTATTTAA 1338 0.4425 MGWPIIGETLEFALSCQGGNPGRFLNDRMNKYSPQVFKTSLLEANMAVMCGPSGNKFLFSNEDKLVVSWWQRSMKKILCFPSVFNETLTGDKFRPPTFLPEFLKPEALQHYIATMDSMASEHIELNWSPNREVLVFPLARKYSFALAFRLFMSIDDPEYVEMISHPFQILNEGFLSVPIDIPGTTFNWALKASKFIHNELLAIIRKRKMELEQKGDSAARDLLSHMLLASDENCYVKSEMEISTQVICLLFATHHTTSSVITFILKYLAEFPDVYSKVLKEQKEIAKSKGPEGFLKWDDIQKMKYTWNVANETMRLTPPVQGTFREAITDITYAGFTIPRGWKMHWNVNTTHRDPKYFPDPEKFNPSRFEGKGPQPFTFVPFGGGPRMCPGREYARAQVLAFIHHVVTRFKWEKVDPCEKVAYNPSPIPSKGFPIRLQPLQNGSI* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1918 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 382 391 IPR017972 GO:0005506|GO:0016705
Vvi18g1918 445 PRINTS E-class P450 group I signature 261 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 PRINTS E-class P450 group I signature 241 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 PRINTS E-class P450 group I signature 389 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 PRINTS E-class P450 group I signature 379 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 PRINTS E-class P450 group I signature 347 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 FunFam Taxadiene 5-alpha hydroxylase 1 440 - -
Vvi18g1918 445 PANTHER CYTOCHROME P450 26 1 427 - -
Vvi18g1918 445 SUPERFAMILY Cytochrome P450 2 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 CDD CYP90-like 28 439 - -
Vvi18g1918 445 Gene3D Cytochrome P450 1 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 Pfam Cytochrome P450 3 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 PRINTS P450 superfamily signature 252 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 PRINTS P450 superfamily signature 380 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1918 445 PRINTS P450 superfamily signature 308 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1918 Vvi-Chr18 26414629 26416346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1918 2 344 Cytochrome P450 AT5G36110 45.087 2.59e-99 300