Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1914 ATGAGGCTAACGCCACCTGTTCAAGGAGCCTTTAGGGAAGTCATTAAAAACTTCACTTACGCAGGTTTTACTATTCCAAAGGGATGGAAGACACATTGGAACGTGAATACAACACACAGAAATACCAAATACTTACCAGATCCTGAGAAATTTGATCCCTCGAGATTTGAAGGAAGAGAACCTGAACCATTCACTTTTGTACCCTTTGGGGAAGGACCTCGGATGTGCCCAGGAAGGGAATATGCTCGAGCTCAAGTACTTGTTTTCATACATAATATTGTGACGAAATTCAAATGGGAGAGAGTAGATCCAAACGAAAAGATTTCTTATAATCCATCTCCCATTCCAGCAAAGGGCTTCCCTATTTGCCTCCAGCCTCTAGAAAATATATATTGA 396 0.4116 MRLTPPVQGAFREVIKNFTYAGFTIPKGWKTHWNVNTTHRNTKYLPDPEKFDPSRFEGREPEPFTFVPFGEGPRMCPGREYARAQVLVFIHNIVTKFKWERVDPNEKISYNPSPIPAKGFPICLQPLENIY* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1914 131 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 69 78 IPR017972 GO:0005506|GO:0016705
Vvi18g1914 131 FunFam Uncharacterized protein 1 127 - -
Vvi18g1914 131 Pfam Cytochrome P450 1 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1914 131 SUPERFAMILY Cytochrome P450 1 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1914 131 PANTHER CYTOCHROME P450 26 1 115 - -
Vvi18g1914 131 Gene3D Cytochrome P450 1 123 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1914 131 PRINTS E-class P450 group I signature 76 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1914 131 PRINTS E-class P450 group I signature 8 26 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1914 131 PRINTS E-class P450 group I signature 66 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1914 Vvi-Chr18 26365667 26366158 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1914 1 121 Cytochrome P450 AT3G19270 44.628 2.42e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1914 K20667 - vvi:100261835 287.73