Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1913 ATGGCTTCCTCTACCCAAAAACCCTCTTCTTCTACCTCAGTCCGTAAATATGAGTTCGAAGTGTTCTTGAGTTTTAGAGGATGTGAACAACTCCGAAGTTTCCCATCCAGCATGAAGTTTGAATCTCTTGAAGTTCTTTATCTTAATTGTTGTCCAAACTTGAAGAAGTTTCCTGAGATCCATGGGAATATGGAATGTTTGAAGGAGCTTTATTTAAACGAGAGTGGGATCCAAGAACTACCAAGTAGCATTGTGTATTTAGCATCTCTTGAAGTCCTTAATCTCTCAAATTGTTCAAACTTCGAGAAATTTCCTAAGATCCATGGGAATATGAAATTTTTGAGGGAGCTTTATTTAGAAGGATGTCCAAAGTTTGAGAATTTTCCGGATACATTTACCTATATGGGACATTTAAGGAGGCTTCATTTACGTAAGAGTGGTATTAAAGAACTCCCAAGCAGCATTGGGTATTTGGAATCTCTTGAAATTCTTGACATCTCATGTTGCTCAAAATTTGAGAAATTCCCAGAGATCCAAGGGAATATGAAATGCTTGAAGAACCTTTATTTAAGGAAGACTGCTATTCAGGAACTCCCAAACAGCATTGGGTCCTTGACATCTCTTGAAATTCTTTCTCTTGAAAAATGTTTGAAGTTTGAGAAATTTTCAGATGTATTTACCAATATGGGACGTTTAAGGGAGCTATGTCTACATAGGAGTGGTATTAAGGAACTCCCAGGGAGCATTGGGTATTTGGAATCTCTTGAAAATCTTAACCTCTCATATTGCTCAAACTTTGAGAAATTTCCAGAGATCCAAGGGAATATGAAATGCTTGAAGGAGCTTTCTTTAGAGAATACCGCTATTAAGGAACTCCCAAATAGCATTGGGCGCTTGCAGGCCCTTGAAAGTCTTACTCTCAGTGGTTGCTCAAATCTTGAGAGGTTTCCTGAGATCCAAAAAAATATGGGGAATCTATGGGCTCTTTTTCTAGATGAGACTGCTATTGAAGGATTACCCTACTCAGTAGGTCATCTCACCAGACTTGATCACTTAAATTTGGACAATTGTAAAAACTTGAAAAGTCTTCCAAACAGTATATGTGAGTTGAAATCCCTCGAAGGCCTCTCTCTCAATGGTTGTTCAAATCTAGAGGCTTTTTCAGAGATCACGGAGGATATGGAACAATTAGAACGCCTTTTTTTACGTGAGACGGGTATCTCAGAGCTGCCATCATCAATTGAACATCTGAGAGGTCTTAAATCCTTGGAATTGATCAATTGTGAGAACCTTGTGGCTCTTCCCAATAGCATCGGTAATTTGACATGTCTCACTAGTCTTCATGTTCGTAACTGTCCAAAGCTCCACAACTTGCCTGACAATTTGAGAAGCCTACAATGTTGCTTAACAATGCTAGATCTAGGTGGTTGCAATCTGATGGAAGAAGAAATCCCCAGTGATTTATGGTGCCTATCCTTACTGGTATTTTTAAACATAAGTGAAAACCGTATGCGTTGCATCCCTGCTGGCATCACTCAACTTTGTAAGCTTCGTACCCTTCTCATTAATCATTGTCCGATGCTTGAAGTAATTGGAGAGCTTCCATCAAGTCTTGGATGGATAGAGGCACATGGTTGTCCAAGCCTGGAAACTGAAACTTCTTCAAGTCTACTCTGGTCTTCTTTGCTCAAACACTTGAAATCACCAATTCAGCAGAAATTTAATATTATCATTCCAGGAAGTAGTGGAATACCAGAGTGGGTAAGTCATCAAAGAATGGGATGTGAAGTAAGTGTAGAGCTTCCAATGAATTGGTATGAAGATAATAACTTGTTAGGATTTGTTTTATTCTTCCATCATGTTCCCCTTGATGATGATGATGAATGCGTGAGAACATCTGGTTTTATTCCACATTGTAAATTGGCGATATCCCATGGTGATCAATCTAAACGACTGGATGATATTGGTTTTCATCCTCATTGTAAAACATACTCTATTAGCGGTTTATCATATGGCAGCACACGCTACGACAGTGGTAGCACATCAGATCCAGCACTGTGGGTGACGTATTTCCCTCAGATTGGCATTCCAAGCAAGTATCGATCCAGAAAGTGGAACAACTTCAAGGCTCACTTTGACAATCCTGTCGGTAATGCCTCTTTTACATGTGGCGAAAACGCATCCTTTAAAGTGAAAAGTTGTGGGATACATCTCATATACGCCCAAGATCAGAAGCATTGGCCTCAGCCGTCGAGAAAAAGGCCTGCTAATAGAGAAGATCACTCATCCAAGAAAAAAATTCTCTAG 2307 0.3953 MASSTQKPSSSTSVRKYEFEVFLSFRGCEQLRSFPSSMKFESLEVLYLNCCPNLKKFPEIHGNMECLKELYLNESGIQELPSSIVYLASLEVLNLSNCSNFEKFPKIHGNMKFLRELYLEGCPKFENFPDTFTYMGHLRRLHLRKSGIKELPSSIGYLESLEILDISCCSKFEKFPEIQGNMKCLKNLYLRKTAIQELPNSIGSLTSLEILSLEKCLKFEKFSDVFTNMGRLRELCLHRSGIKELPGSIGYLESLENLNLSYCSNFEKFPEIQGNMKCLKELSLENTAIKELPNSIGRLQALESLTLSGCSNLERFPEIQKNMGNLWALFLDETAIEGLPYSVGHLTRLDHLNLDNCKNLKSLPNSICELKSLEGLSLNGCSNLEAFSEITEDMEQLERLFLRETGISELPSSIEHLRGLKSLELINCENLVALPNSIGNLTCLTSLHVRNCPKLHNLPDNLRSLQCCLTMLDLGGCNLMEEEIPSDLWCLSLLVFLNISENRMRCIPAGITQLCKLRTLLINHCPMLEVIGELPSSLGWIEAHGCPSLETETSSSLLWSSLLKHLKSPIQQKFNIIIPGSSGIPEWVSHQRMGCEVSVELPMNWYEDNNLLGFVLFFHHVPLDDDDECVRTSGFIPHCKLAISHGDQSKRLDDIGFHPHCKTYSISGLSYGSTRYDSGSTSDPALWVTYFPQIGIPSKYRSRKWNNFKAHFDNPVGNASFTCGENASFKVKSCGIHLIYAQDQKHWPQPSRKRPANREDHSSKKKIL* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1913 768 Gene3D Ribonuclease Inhibitor 126 218 IPR032675 -
Vvi18g1913 768 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 207 319 - -
Vvi18g1913 768 MobiDBLite consensus disorder prediction 747 768 - -
Vvi18g1913 768 Pfam C-JID domain 582 744 IPR045344 -
Vvi18g1913 768 Gene3D Ribonuclease Inhibitor 388 573 IPR032675 -
Vvi18g1913 768 Gene3D Ribonuclease Inhibitor 219 387 IPR032675 -
Vvi18g1913 768 Gene3D Ribonuclease Inhibitor 19 125 IPR032675 -
Vvi18g1913 768 SMART LRR_typ_2 276 299 IPR003591 -
Vvi18g1913 768 SMART LRR_typ_2 491 514 IPR003591 -
Vvi18g1913 768 SMART LRR_typ_2 346 370 IPR003591 -
Vvi18g1913 768 SMART LRR_typ_2 135 158 IPR003591 -
Vvi18g1913 768 SMART LRR_typ_2 394 417 IPR003591 -
Vvi18g1913 768 SMART LRR_typ_2 229 252 IPR003591 -
Vvi18g1913 768 SMART LRR_typ_2 182 205 IPR003591 -
Vvi18g1913 768 SMART LRR_typ_2 64 87 IPR003591 -
Vvi18g1913 768 MobiDBLite consensus disorder prediction 745 768 - -
Vvi18g1913 768 SUPERFAMILY L domain-like 244 575 - -
Vvi18g1913 768 SUPERFAMILY L domain-like 23 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1913 Vvi-Chr18 26356922 26361843 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1913 189 532 WRKY Transcription Factor Family AT4G12020 30.495 1.63e-18 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1913 - - vvi:100256743 1511.89