Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1741 ATGGCTTCCACAGCTGCTCCCCCACCTTCATTCTCCCTCCTTCTCAAAACCCAGAACACCACAAACCAACTCAGATCAGTAACACCCAGCAGAAGAAGAAGAAGAAGCAGCAGCAGCCAAGGTGGTTTTTGGATTTTAGCAGCAGCCCAGGACTCGAAAAACCCCAGGCAGAGAGCCCCACCAGGAGTTGACACGAGAATCCACTGGGACAACCCAGATGAAGGGTGGATTGGAGGAAGCAGTTCAAAGCCAAAGCTGAATGGAGAAGAGGAGGAGAAGAACCTGTTGGGTGAAGAGTTTTCTGATTTGCTCGATGACTCGTCTGATTCTCATTACCAGTTCTTAGGAATATCTGCACAAGCTGATCTGGAAGAGATTAAAGCTGCTTACCGGCGTTTATCGAAAGAGTACCATCCAGACACAACTTCACTTCCACTAAAAGCAGCATCTGACAAGTTCTTAAAACTAAGAGAAGTTTACGACGTTTTGTGTGATGAAGAGAGACGCAGGTTTTACGACTGGACACTTGCTCAAGAGGCTGCAAGCCGCAAAGCAGAGAAGATGAAAATGAAGTTAGAGGATCCTTACCAGAAAGATGTCCAGAACTGGGAATCCATTCCAGACATGGTAGACCGTCTAGGTGGAAGGAACATGGAGTTGAGTGATCAAGCAGTCACAGCCCTCACCTTTGATATATTAATCATTATTTTTGCAATTTGTTGTATAATTTATGTGCTTGTCTTCAAGGAACCAAATTACTAG 762 0.4528 MASTAAPPPSFSLLLKTQNTTNQLRSVTPSRRRRRSSSSQGGFWILAAAQDSKNPRQRAPPGVDTRIHWDNPDEGWIGGSSSKPKLNGEEEEKNLLGEEFSDLLDDSSDSHYQFLGISAQADLEEIKAAYRRLSKEYHPDTTSLPLKAASDKFLKLREVYDVLCDEERRRFYDWTLAQEAASRKAEKMKMKLEDPYQKDVQNWESIPDMVDRLGGRNMELSDQAVTALTFDILIIIFAICCIIYVLVFKEPNY* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1741 253 MobiDBLite consensus disorder prediction 1 90 - -
Vvi18g1741 253 FunFam DnaJ homolog subfamily C member 4 99 197 - -
Vvi18g1741 253 SMART dnaj_3 109 168 IPR001623 -
Vvi18g1741 253 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 1 251 IPR044618 -
Vvi18g1741 253 Pfam DnaJ domain 111 173 IPR001623 -
Vvi18g1741 253 MobiDBLite consensus disorder prediction 1 45 - -
Vvi18g1741 253 PRINTS DnaJ domain signature 112 130 IPR001623 -
Vvi18g1741 253 PRINTS DnaJ domain signature 148 168 IPR001623 -
Vvi18g1741 253 PRINTS DnaJ domain signature 130 145 IPR001623 -
Vvi18g1741 253 Gene3D DnaJ domain 99 198 IPR036869 -
Vvi18g1741 253 ProSiteProfiles dnaJ domain profile. 110 176 IPR001623 -
Vvi18g1741 253 SUPERFAMILY Chaperone J-domain 73 172 IPR036869 -
Vvi18g1741 253 CDD DnaJ 111 165 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1741 Vvi-Chr18 23472975 23476480 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1741 111 178 C2H2 Transcription Factor Family AT1G74250 37.500 6.72e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1741 K23051 - vvi:100252905 471.085