Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1723 ATGATGCACCCTTTATTGCAACAAATGGGTCAAGGAGTTGTTCATCAAGCATGTCCTCAAGAGCCAGGAAAACAGAGCAGATTGTGGAGATCAGAGGATGTCCATCGCATATTGCTCAAAAATGAAGGGACTGATGCGATTGAAGGGATATTTCTAGATACATCTCCAGCAGAACCAATAGAGTTTACCATTCTAGATACATCTCCAGCAGTACCAATAGAGTTTACCACTGAAGCTTTTAAAATGATGAACAAACTTAGATTACTCAAAGTTTGTCGAGGTCATAAATGTGGTTCCATGGTAAAAAATTATGAAGTGCGTGTTTCTACCAACTTTGAATTTCCATCTTATGAGTTAAGATATCTTCATTGGGATGGATATCCTTTGGAATATTTGCCATCAAATTTTCATGGAGAGAACCTTGTTGAATTGAATCTGCGGTATAGTAAACTAAGAGTGCTTTGGCAAGGGCTTAAGCCTCCTGAGAAGTTAAAGCCTCTTGAGAAGTTAAAGGTTATCAATCTCAGTCACTCTCAGCAGCTCATTCAAATCCCAGACTTCTCCGATACACCAAATCTGGAGAGTCTAATTCTTAAAGGGTGCACAAACCTTGAGAACATTCCAAGCAGCATTTGGCACTTGGATTCTCTTGTAAATCTTGATCTCTCTCACTGTTCAAAACTCCAGGAACTTGCAGAGATCCCGTGGAATCTATACTCATTGGAATATTTGAACTTGGCATCCTGCAAAAATCTTAAGAGCCTTCCAGAGAGCCTTTGTAACTTGAAATGTCTTAAGACTCTCAATGTAATCGGGTGTTCAAAACTGCCCGACAACCTGGGAAGCCTGGAATGTCTAGAGAAGCTTTATGCATCAAGTTCAGAATTGATTAGCCCTCAATCGGATTCCTCTTTGGCTGGTTTGTGCTCCTTAAAAGTATTGGATATGCATGACACCAACCTAATGCAACGTGCAATCAGTGGTGACATTGGCAGCTTATACTCATTGGAAGAATTAAACCTAAGTTACTGTAATTTAACAGAAAAAGAAATTCCCGATGATATTTGCTGCCTATACTCATTGAGAGTATTAGATCTAAGTGGAAACCTTTTTCTTGGAGTAACTGATGCCATAAGTCAACTTTCTGAGCTAAGAGAGCTTGGGTTGAGGCACTGCAAGAGTCTTCTAGAAATTCCAAAGCTTCCATCAAGTCTCAGAGTCCTAGATGCCCATGATTGCACAGGCATCAAAACGTTATCAAGTACATCAGTGTTGCAATGGCAGTGGCAGTTAAATTGCTTCAAATCTGCTTTTTTACAAGAAATTCAGGAGATGAAATACAGAAGGCTTTTGTCTCTTCCAGCAAATGGTGTCAGCCAGGGATTTAGTACTGTTATCCCTGGAAGTGGAGAACTTCCAGAGTGGATACAACACCAGGGTGTTGGCAATGAAGTAATAGTACCGCTACCTCCTAATTGGTACGACAAGGACTTCTTGGGATTGGCTTTATGCTGTGTTTATATTCCACAACAGGGTGAACCAGAGAGTAGTACGTCTGAGAATGAATCAATGGATGAACCAATGGATGAACCAGAGAGTAGTACATCTGAGAATGCCACGGTGAATATCACGCAACCTTATCATTTAGGATGTGAATTGACTTTCCTTGATGATGAAATTGGGTTTTTGGATTATCTCTCCTGTGGATCATCCTGCCAATGCGACCATAATGATGGTGTATCAGAGTCAGTGTGGGTAACGTATTATTCTAATGTTGCTATTAAGCACAGATATCGCTCCGATAAACCAAGGTTTTTAAAGGCTTCATTTCGTGGCCATGTTAATGGTAAACCAGTGAAGGTGGAACAGTGTGGGATTGGTCTTGTACACGTTGATCTTGAGAACAGCAGTGGAGTTGGAAGTGGTAAGCTCTAG 1935 0.4067 MMHPLLQQMGQGVVHQACPQEPGKQSRLWRSEDVHRILLKNEGTDAIEGIFLDTSPAEPIEFTILDTSPAVPIEFTTEAFKMMNKLRLLKVCRGHKCGSMVKNYEVRVSTNFEFPSYELRYLHWDGYPLEYLPSNFHGENLVELNLRYSKLRVLWQGLKPPEKLKPLEKLKVINLSHSQQLIQIPDFSDTPNLESLILKGCTNLENIPSSIWHLDSLVNLDLSHCSKLQELAEIPWNLYSLEYLNLASCKNLKSLPESLCNLKCLKTLNVIGCSKLPDNLGSLECLEKLYASSSELISPQSDSSLAGLCSLKVLDMHDTNLMQRAISGDIGSLYSLEELNLSYCNLTEKEIPDDICCLYSLRVLDLSGNLFLGVTDAISQLSELRELGLRHCKSLLEIPKLPSSLRVLDAHDCTGIKTLSSTSVLQWQWQLNCFKSAFLQEIQEMKYRRLLSLPANGVSQGFSTVIPGSGELPEWIQHQGVGNEVIVPLPPNWYDKDFLGLALCCVYIPQQGEPESSTSENESMDEPMDEPESSTSENATVNITQPYHLGCELTFLDDEIGFLDYLSCGSSCQCDHNDGVSESVWVTYYSNVAIKHRYRSDKPRFLKASFRGHVNGKPVKVEQCGIGLVHVDLENSSGVGSGKL* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1723 644 Gene3D Ribonuclease Inhibitor 71 236 IPR032675 -
Vvi18g1723 644 Gene3D Ribonuclease Inhibitor 237 275 IPR032675 -
Vvi18g1723 644 Gene3D Ribonuclease Inhibitor 276 456 IPR032675 -
Vvi18g1723 644 MobiDBLite consensus disorder prediction 512 537 - -
Vvi18g1723 644 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 413 IPR044974 GO:0006952
Vvi18g1723 644 Pfam C-JID domain 471 630 IPR045344 -
Vvi18g1723 644 SMART LRR_typ_2 238 262 IPR003591 -
Vvi18g1723 644 SMART LRR_typ_2 333 357 IPR003591 -
Vvi18g1723 644 SMART LRR_typ_2 358 381 IPR003591 -
Vvi18g1723 644 Pfam Leucine Rich Repeat 140 157 IPR011713 -
Vvi18g1723 644 SUPERFAMILY L domain-like 64 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1723 Vvi-Chr18 23124268 23126823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1723 2 315 WRKY Transcription Factor Family AT4G12020 35.440 1.32e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1723 - - vvi:100256299 1305.81