Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1719 ATGGATTCCATGAAAGGACAAGGAGGCATCCAGATGCTGCTGACTGCAGAGCAGGAGGCCCGACAGATTATTTCCAATGCTAAAAACTTAAAGTTGACGAGGTTGAAACAAGCTAAAGAAGAAGCTGAGAGGGAAGTGAAACTCTACCACTCCAATATGGAAGCTGCCCACCAGAAGAAAATTTCTGAGACAAGTGGGAGCAGTGGGTCAAATGTAAAACGGCTTGATGAGGAAACTGCAATGAGGATTCAAAGCTTGAAAGAGTCTGCTTCTAGGGTTTCATCAGATGTTGTTGCCATGCTCATCAAGCATGTCACAGCGGTGGAAGCTTGA 333 0.4535 MDSMKGQGGIQMLLTAEQEARQIISNAKNLKLTRLKQAKEEAEREVKLYHSNMEAAHQKKISETSGSSGSNVKRLDEETAMRIQSLKESASRVSSDVVAMLIKHVTAVEA* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1719 110 Gene3D - 1 110 - -
Vvi18g1719 110 Pfam Vacuolar (H+)-ATPase G subunit 7 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vvi18g1719 110 NCBIfam V-type ATPase subunit G 6 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Vvi18g1719 110 Coils Coil 25 59 - -
Vvi18g1719 110 FunFam V-type proton ATPase subunit G 3 110 - -
Vvi18g1719 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1719 Vvi-Chr18 23069865 23070356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1719 8 108 Primary Pumps ATPases(2) AT4G23710 55.446 2.92e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1719 K02152 - vvi:100855246 207.223