Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1696 ATGTTCTTTAGAAGATGCTGTATTGGAGGCATTTTCTATGGAAATGAGAGTGGGGATGCTTTGAAAGATGTGGAGTTGCTGAATGCTGTTTCCAGTGGTTCTTCTTATGATATTCAATTTGTTACAGTTATGGCAATATGTAATACAGTTATACCTGTGGAAAGCAAAACTGGAGCAATCTCACACGAGGCACAATCTCAAGATGAAGATGCTTTTGTTCAGGCTGCTGCTTGCTTGCATACGGTTTTTGTCAATAAGAATGCAAATACTCTTGAAATCAATTTCAACGCTTCAATAATTCAGTATGAAGTATTAGACACTCTAGAGTTCATTTCTGATAGGAAAAGAATCTCAGCTATGGTGAAAGATTGCCAGAATAGAAAGATTTTTCTTTTGTCAAAAGAAGCAGATGAAGTCATCAAACCTGATGCATGTGCTGGATAA 444 0.3671 MFFRRCCIGGIFYGNESGDALKDVELLNAVSSGSSYDIQFVTVMAICNTVIPVESKTGAISHEAQSQDEDAFVQAAACLHTVFVNKNANTLEINFNASIIQYEVLDTLEFISDRKRISAMVKDCQNRKIFLLSKEADEVIKPDACAG* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1696 147 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 141 - -
Vvi18g1696 147 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 32 140 IPR023299 GO:0000166
Vvi18g1696 147 Gene3D - 1 145 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1696 Vvi-Chr18 22580170 22580613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1696 1 147 Primary Pumps ATPases AT5G44240 71.429 1.17e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1696 K01530 - vvi:100252404 245.358