Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1664 ATGGCTTCTTCCAGCACCCGTAGAGCCTCTTCTTCTACTTCTTCTATTTCTCGTACTTATGATGTGTTCTTGAGTTTTAAAGGCGAAGACACTCGCAGAAATTTCACCGATCATCTTTATACCGCTTTGGTCGCATGTGGAATTCAAACTTTCAGAGACAATGAAGAATTAGAGAAAGGAGGAGATATTGCATCTGATCTCTCAAGAGCTATAGAAGAATCAAGGATTTTTATTATTATTTTCTCCAAAAATTATGCTTACTCCACATGGTGTTTAAATGAACTTGTAAAAATCGTTGAATGCATGAAGCAAAAGGATATAATGGTTCTACCAATATTCTACCATGTGGATCCATCAGATGTACGAAGGCAAAGGGGAAATTTTGGAGATGCACTTGCCCATCATGAGGGAGATGCTGATCAACAAAAGAAGCAGATGGTACAAAAATGGCGGATTGCCTTAACCAAAGCAGCAGATCTATCTGGATGCCACGTGGATGACCAGTATGAGACTGAGGCTGTCAATGAAATTATTAATAAAATTGTTGGAAGTTTAAATTGTCAACCCTTAAATGTGGGCAAAAATATAGTTGGAATTAGTGTTCATTTAGAAAATTTGAAATCAATGATGAACACTGAATTGAATAAGGTGAACGTGATTGGGATATGTGGAACTGGTGGGATTGGTAAAACTACGATTGCCAAGGCTATTTATAATGAGATCTCATATCAGTATGATGGTAGTAGCTTTCTTAGAAATATGAGAGAAAGATCCAAAGGTGATATACTTCAATTACAAAAAGAACTTCTTCATGGAATCCTAAAAGGAAAAGGTTTTAGAATAAGCAATGTCGATGAAGGAGTTAATATGATAAAGAGGTGTCTCAATTCTAAAAGAGTTCTTGTTATTTTTTATGATGTAGATGATTTGACACAACTAGAATATTTGGCTGAAGAGAAGGATTGGTTTGATGTAAAAAGTACAATCATCATTACCTCTAGAGACAAACAAGTGCTTGCTCATTATGGAGTGCATATATCATATGAGGTTTCGAAATTTAATAATAAAGAAGCAATTGAACTCTTTAGTTTGTGGGCATTCAAACAAAATCTTCCCAAGGAAGCTTATAAAAACCTCTCATACAATATGATAGAGTATGCTGATGGCCTTCCATTAGCACTTAAACTTTTAGGTGCCTCTCTTTTTGGAAAGAAAATAAGCGAATGGGAAAGTGCATTATATAAGCTAAAAAGGATACCTCACATGGAAATTAACAAGGTACTTAGAATAAGTTTTGATGGACTTGATGATATGGATAAGAAGATTTTTTTGGATGTTGCATGTTTTTTCAAGGAGAAGGACAAATATTTTGTTTCAAGAATATTAGGCCCTCATGCCGAGTATGGAATAGCAACTCTAAATGACAAATGTCTCATAACTATTTCAAAAAACATGATAGATATGCATGATTTAATACAACAAATGGGCAGAGAAATTATTCGTCAAGAATGTCCTGAAGATCTTGGAAGAAGGAGTAGAGTATGGGATTCTGATGCATATCATGTGTTGACAAGAAATATGGGGACACGAGCAATCGAAGGACTATTCCTAGATATTTGTAAATTTGATCCAATACAGTTTGCTAAAGAATCTTTCAAACAGATGGATAGACTTAGATTGCTCAAAATCCATAAAGGTGATGAATATGATCTCATATCAGTATTTGGTAGCCACCCTTATGAAAAGCTATTTTATGAAGACTGCCTTCCAAGGGACTTTGAGTTTTCTTCTAAGTTAACTTATCTCCATTGGGATGGATACTCTTTAGAATCATTGCCAACAAATTTTCATGCAAAGGACCTTGTTGAACTCATATTAAGAGGCAGTAATATAAAGCAACTTTGGAGAGGGAACAAGCTCCATAACGAGTTGAAGGTTATCAATCTCAATTATTCAGTGCATCTCACTGAAATCCCGGACTTCTCAAGTGTGCCAAACCTGGAGATTCTAACTCTAGAAGGGTGTGTAAAACTGGAGTGTCTTCCAAGAGGCATTTATAAGTGGAAATACCTTCAAACTTTGTCTTGCCGGGGCTGTTCAAAGCTAAAGAGATTTCCGGAAATCAAGGGCAATATGAGAAAGCTAAGAGAGCTTGATTTAAGTGGAACAGCTATAAAAGTGCTACCATCATCATTGTTTGAACATCTAAAAGCTCTTGAAATTCTCAGTTTTAGAATGAGTTCAAAACTCAACAAAATCCCTATTGATATTTGTTGCCTATCATCATTGGAAGTATTGGATCTAAGTCACTGCAATATAATGGAAGGAGGAATTCCCAGTGATATTTGTCATTTATCATCACTGAAAGAACTAAATCTGAAATCGAATGATTTTAGAAGCATTCCTGCTACCATCAATCAACTTTCTAGGCTGCAAGTCCTTAACTTAAGTCACTGCCAGAATCTTCAACACATTCCAGAGCTTCCATCGAGTCTAAGGCTTTTAGATGCGCATGGTTCAAATCCTACTTCATCAAGAGCCTCATTTTTGCCAGTTCATTCTCTGGTCAATTGCTTCAATTCGGAAATTCAGGATTTGAATTGCAGTAGTCGGAATGAAGTATGGTCCGAGAATAGTGTTTCTACCTACGGCAGCAAGGGAATTTGTATTGTTCTTCCTGGAAGTAGTGGAGTTCCAGAGTGGATAATGGATGATCAGGGTATAGCGACAGAGCTTCCTCAGAATTGGAACCAAAATAATGAGTTTTTGGGATTTGCTTTGTGCTGTGTTTATGTTCCACTTGATGATGAATCTGAGGACGTATCCGAGAATGAATCAGACAATAGATCTGAGGATGAATCTGCTCACACCTCGGAGAATGAAATAGATGATAAATCTAAGAATGATTCTGTGGCTGAATTGTCGGAGTATGTATTTACGCCCTCTTGTCGTCTGAAATGTTCTTTGAAAATCTGTGGTGATAACATTACATTGGTGGATCTTCCCCTATATGAATCTAGTTGTTTTTGCTATGACCAAGATAATGACAGCGTATCACGTCAAACGTGGGTGATTTGGTATTCCAAGGCAGCCATTCAGGAGTGGTATCCCTCTGATCAATGGCCTTACATTGTACCTTTATTTGAGGGCTTTTACAATACTTTTAAGAAAGCCTTTAAAGTGGAGGAGTGTAAAGTCCGCCTTATATACTCCCAAGACCTTCCACCGACGACACAGACTCAGGATGCGCATGCAGATGTTAGAAGGTGCAGTGAATGCCAGCAAGAGGCGACATGCCGATGGCGTGGTTGTTTTAAGGACAGTGACATGAAGGAGCTACCCATTATAGAGAATCCCTCGGAGCTTGATGGTTTATGTTTGCGGGATTGTAAAACCCTCAAGAGTCTGCCAAGCAGTATTTGTGAGTTCAAATCCCTTACAACTCTCTCTTGCTCTGGCTGTTCACAACTAGAGAGCTTTCCTGAAATCCTGGAAGATATGGTAGTCTTTCAAAAGCTTGATTTAGATGGAACTGCCATAAAAGAGATACCCTCATCAATTCAGCGTCTAAGAGGGCTTCAATATTTGAATCTGGCATATTGCGAAAACCTTGTGAATCTTCCGGAAAGTATTTGTAATCTGACATCTTTAAGAACTCTCATTGTCGTTTCCTGTCCAAAACTCAACAAATTGCCAGAGAACTTGGGGAGATTGCAATCTCTAGAATACCTTTATGTTAAAGATTTGGATTCAATGAATTGTCAATTGCCGTCTTTGTCGGGTTTGTGCTCCTTGATAACATTACAACTGATCAACTGCGGTCTAAGGGAAATCCCCAGTGGTATTTGGCACCTATCGTCACTGCAACATTTAAGCCTCAGAGGGAACCGGTTCAGTAGCATACCAGACGGGATCAACCAACTTTATAACTTGATTGTTTTCGACTTGAGTCATTGCCAGATGCTTCAACATATTCCAGAGCTTCCATCAAGTTTAGAATATCTAGATGCCCATCAATGCTCATCACTGGAAATTTTATCAAGTCCCTCAACTCTACTCTGGTCTTCTTTATTCAAATGTTTTAAATCCAGGATTCAGGAGTTCGAAGTTAATTTTAAAGTCCAAATGTTTATTCCTGGAAGTAATGGAATTCCAGGGTGGATAAGCCACCAGAAAAACGGGTCCAAAATAACAATGAGACTTCCTCGGTATTGGTACGAAAACGATGACTTCTTGGGCTTTGCTTTGTGCTCTCTTCATGTTCCACTTGATATCGAAGAAGAAAACAGGAGTTTCAAATGTAAATTGAATTTCAACAACCGTGCATTTTTGTTGGTGGATGATTTCTGGTCTAAACGCAATTGTGAACGCTGCCTTCATGGAGATGAATCAAATCAAGTGTGGTTGATATATTATCCAAAGTCAAAAATTCCGAAAAAATACCACTCAAATGAGTATAGAACCTTGAACACTTCATTTAGTGAATACTTTGGTACTGAACCAGTGAAAGTGGAGCGGTGTGGATTCCACTTTATATATGCCCAGGAGGATTATGGATAG 4560 0.3789 MASSSTRRASSSTSSISRTYDVFLSFKGEDTRRNFTDHLYTALVACGIQTFRDNEELEKGGDIASDLSRAIEESRIFIIIFSKNYAYSTWCLNELVKIVECMKQKDIMVLPIFYHVDPSDVRRQRGNFGDALAHHEGDADQQKKQMVQKWRIALTKAADLSGCHVDDQYETEAVNEIINKIVGSLNCQPLNVGKNIVGISVHLENLKSMMNTELNKVNVIGICGTGGIGKTTIAKAIYNEISYQYDGSSFLRNMRERSKGDILQLQKELLHGILKGKGFRISNVDEGVNMIKRCLNSKRVLVIFYDVDDLTQLEYLAEEKDWFDVKSTIIITSRDKQVLAHYGVHISYEVSKFNNKEAIELFSLWAFKQNLPKEAYKNLSYNMIEYADGLPLALKLLGASLFGKKISEWESALYKLKRIPHMEINKVLRISFDGLDDMDKKIFLDVACFFKEKDKYFVSRILGPHAEYGIATLNDKCLITISKNMIDMHDLIQQMGREIIRQECPEDLGRRSRVWDSDAYHVLTRNMGTRAIEGLFLDICKFDPIQFAKESFKQMDRLRLLKIHKGDEYDLISVFGSHPYEKLFYEDCLPRDFEFSSKLTYLHWDGYSLESLPTNFHAKDLVELILRGSNIKQLWRGNKLHNELKVINLNYSVHLTEIPDFSSVPNLEILTLEGCVKLECLPRGIYKWKYLQTLSCRGCSKLKRFPEIKGNMRKLRELDLSGTAIKVLPSSLFEHLKALEILSFRMSSKLNKIPIDICCLSSLEVLDLSHCNIMEGGIPSDICHLSSLKELNLKSNDFRSIPATINQLSRLQVLNLSHCQNLQHIPELPSSLRLLDAHGSNPTSSRASFLPVHSLVNCFNSEIQDLNCSSRNEVWSENSVSTYGSKGICIVLPGSSGVPEWIMDDQGIATELPQNWNQNNEFLGFALCCVYVPLDDESEDVSENESDNRSEDESAHTSENEIDDKSKNDSVAELSEYVFTPSCRLKCSLKICGDNITLVDLPLYESSCFCYDQDNDSVSRQTWVIWYSKAAIQEWYPSDQWPYIVPLFEGFYNTFKKAFKVEECKVRLIYSQDLPPTTQTQDAHADVRRCSECQQEATCRWRGCFKDSDMKELPIIENPSELDGLCLRDCKTLKSLPSSICEFKSLTTLSCSGCSQLESFPEILEDMVVFQKLDLDGTAIKEIPSSIQRLRGLQYLNLAYCENLVNLPESICNLTSLRTLIVVSCPKLNKLPENLGRLQSLEYLYVKDLDSMNCQLPSLSGLCSLITLQLINCGLREIPSGIWHLSSLQHLSLRGNRFSSIPDGINQLYNLIVFDLSHCQMLQHIPELPSSLEYLDAHQCSSLEILSSPSTLLWSSLFKCFKSRIQEFEVNFKVQMFIPGSNGIPGWISHQKNGSKITMRLPRYWYENDDFLGFALCSLHVPLDIEEENRSFKCKLNFNNRAFLLVDDFWSKRNCERCLHGDESNQVWLIYYPKSKIPKKYHSNEYRTLNTSFSEYFGTEPVKVERCGFHFIYAQEDYG* 1520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1664 1519 PRINTS Disease resistance protein signature 294 308 - -
Vvi18g1664 1519 PRINTS Disease resistance protein signature 806 822 - -
Vvi18g1664 1519 PRINTS Disease resistance protein signature 219 234 - -
Vvi18g1664 1519 PRINTS Disease resistance protein signature 387 401 - -
Vvi18g1664 1519 Pfam TIR domain 20 202 IPR000157 GO:0007165
Vvi18g1664 1519 Gene3D Ribonuclease Inhibitor 532 710 IPR032675 -
Vvi18g1664 1519 Gene3D Ribonuclease Inhibitor 1171 1371 IPR032675 -
Vvi18g1664 1519 Gene3D Ribonuclease Inhibitor 711 870 IPR032675 -
Vvi18g1664 1519 Gene3D Ribonuclease Inhibitor 1102 1170 IPR032675 -
Vvi18g1664 1519 ProSiteProfiles Leucine-rich repeat profile. 1287 1308 IPR001611 GO:0005515
Vvi18g1664 1519 MobiDBLite consensus disorder prediction 940 965 - -
Vvi18g1664 1519 Gene3D - 353 436 IPR042197 -
Vvi18g1664 1519 Gene3D - 189 347 IPR027417 -
Vvi18g1664 1519 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 187 - -
Vvi18g1664 1519 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Vvi18g1664 1519 Pfam NB-ARC domain 213 421 IPR002182 GO:0043531
Vvi18g1664 1519 SUPERFAMILY L domain-like 1093 1351 - -
Vvi18g1664 1519 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Vvi18g1664 1519 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 754 IPR044974 GO:0006952
Vvi18g1664 1519 Pfam Leucine Rich Repeat 620 639 IPR011713 -
Vvi18g1664 1519 Pfam Leucine rich repeat 713 773 IPR001611 GO:0005515
Vvi18g1664 1519 SUPERFAMILY L domain-like 488 852 - -
Vvi18g1664 1519 SMART LRR_typ_2 760 784 IPR003591 -
Vvi18g1664 1519 SMART LRR_typ_2 1262 1284 IPR003591 -
Vvi18g1664 1519 SMART LRR_typ_2 1285 1308 IPR003591 -
Vvi18g1664 1519 SMART LRR_typ_2 1214 1238 IPR003591 -
Vvi18g1664 1519 SMART LRR_typ_2 785 808 IPR003591 -
Vvi18g1664 1519 SMART LRR_typ_2 712 735 IPR003591 -
Vvi18g1664 1519 SMART till_3 19 160 IPR000157 GO:0007165
Vvi18g1664 1519 Gene3D - 16 188 IPR035897 -
Vvi18g1664 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 445 IPR027417 -
Vvi18g1664 1519 MobiDBLite consensus disorder prediction 948 965 - -
Vvi18g1664 1519 Pfam C-JID domain 1382 1516 IPR045344 -
Vvi18g1664 1519 Pfam C-JID domain 896 1074 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1664 Vvi-Chr18 21957553 21963810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1664 598 826 WRKY Transcription Factor Family AT4G12020 32.308 2.98e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1664 - - vvi:100259499 3004.93