Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1648 ATGCAACGACGTGTTCGTTCAGATGAACTTCTCAAATCTTCAAGGAAAGATAAATCTGCTCTTTCATTGGGTAGCATCTTCACCAGGCTGATCAACAGGAACACAACAATTCCCATTAAGAAGAGTCAAGTGTTCTCAATAGCAGCTGACAATCACACACAGGTTGGTATCAAGGTACTACAAGGTGAGCGAGAGATGGCATCTGATAACAAGCTCCTTGGTGAGTTTGAGCTTATGGGCATCCCACCAGCTCCCAGGGACATGTCTCAGATTGAAGTCACATTTGATATTGACGCTAATGGAATTGTCACTGTGTCCGCCAAAGACAAGGCCCAGCGAAGGAACAACAAATCACGATCCGCTCATCTGGTGGCCTTTCAGAAGATGAGATTGAGAAGATGGTTTTAA 408 0.4461 MQRRVRSDELLKSSRKDKSALSLGSIFTRLINRNTTIPIKKSQVFSIAADNHTQVGIKVLQGEREMASDNKLLGEFELMGIPPAPRDMSQIEVTFDIDANGIVTVSAKDKAQRRNNKSRSAHLVAFQKMRLRRWF* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1648 135 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 9 129 IPR029047 -
Vvi18g1648 135 PANTHER HEAT SHOCK PROTEIN 70KDA 19 116 IPR013126 GO:0005524|GO:0140662
Vvi18g1648 135 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 22 116 IPR029047 -
Vvi18g1648 135 Pfam Hsp70 protein 23 118 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1648 Vvi-Chr18 21622956 21623656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1648 17 117 Calmodulin-binding Proteins AT5G02490 57.547 1.10e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1648 K04043 - vvi:104882702 260.381