Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1616 ATGTTTTCGATTGATTGTAAACCATGGTTTTTTATCTCTTCGAAGGTTTTTCACGTTAAAATCCAGTGTTATTTGTCTTTTTCTCTCACTCTACCCTTTGATTTATTTTCATTTTTTTATATCATTGGTTACTTGGGCATATATGTTGAATGGAAGAAATATGAACTTGATAGGATACTTCAAAATATCATTGATGAGCATAAAGAGAGCAAGACAACAACAGAAACAGGAAAGCAGGAAGCAAATGAAGATCTAGTTGATATTCTTTTAAAGCTTCAAAAGCATGGAAACTTTGGATTTCCCTTAATTGACAACAACATCAAAGCAATCATATTGAACATTTTTGGTGGTGGAGGTGAGACATCATCAATAGCTATAGAATGGGCAATGTAA 393 0.3232 MFSIDCKPWFFISSKVFHVKIQCYLSFSLTLPFDLFSFFYIIGYLGIYVEWKKYELDRILQNIIDEHKESKTTTETGKQEANEDLVDILLKLQKHGNFGFPLIDNNIKAIILNIFGGGGETSSIAIEWAM* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1616 130 SUPERFAMILY Cytochrome P450 23 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1616 130 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 53 130 - -
Vvi18g1616 130 Pfam Cytochrome P450 25 130 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1616 130 Gene3D Cytochrome P450 12 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1616 Vvi-Chr18 20741429 20743451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1616 57 130 Cytochrome P450 AT5G06900 40.541 2.86e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1616 - K23806 vvi:100254557 110.153