Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1615 ATGCTTGGAAAATCATTTGCTTCTCCTTTGCTGACCTTGGATTTTACAGCACGCTTATCTTTTTCTAGTACTGATCTTGCAACAGCTGCACCAAATAACTTGAACTTCTCAAATGGCATTCTACCAAATGTGACCAGAGGTGCTTGTACCTCCCTTGCTGCAACTAAGAAATGGGAGTTGCATTCAACGGCACAAACTGCAAGTATAACACTGAACGATGAAGATGGGAAGGCATGGGAAGCATGCAAACAAGCTCTGTCAGTGTTTCAGTTCAGTGATGAGGAGGAAGACAAGATCCTTGGGAAAGCATTTGGCCATGTCCATTCACCTTACTGGAGCGAAGAGCGGAAGAAAGAAGTCCCACAATTTGAAATCGTGAGTGAAAAACTGGAGTATTTGAGGAGTTTAAACCTTTCTGATGACGATCTGGGCAAGCTCCTGAAGAAATTCCCTGAAGTTCTCGGGTGCAGTCTTGAAGAGGAGCTGAGGAACAATGTACAGGTCTTAGCCAAGGAGTGGGGAATAGAAGGTAAATCACTAAAAAACGTTCTTCTTCGTAACCCAAAGGTACTGGGTTACAACGTGGACTGCAGGGGAGATTGTATGGCACAATGCACACGCTGCTGGGTTCGGTTTTAG 639 0.4476 MLGKSFASPLLTLDFTARLSFSSTDLATAAPNNLNFSNGILPNVTRGACTSLAATKKWELHSTAQTASITLNDEDGKAWEACKQALSVFQFSDEEEDKILGKAFGHVHSPYWSEERKKEVPQFEIVSEKLEYLRSLNLSDDDLGKLLKKFPEVLGCSLEEELRNNVQVLAKEWGIEGKSLKNVLLRNPKVLGYNVDCRGDCMAQCTRCWVRF* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1615 212 Pfam mTERF 127 194 IPR003690 GO:0003690|GO:0006355
Vvi18g1615 212 Gene3D Transcription termination factor 3, mitochondrial 118 208 IPR038538 -
Vvi18g1615 212 SMART mt_12 144 176 IPR003690 GO:0003690|GO:0006355
Vvi18g1615 212 FunFam uncharacterized protein LOC106769908 62 208 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vvi18g1615 mTERF 5.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1615 - - vvi:100241910 423.705