Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1611 ATGGGGAAAGGAGACGCATTGAAAGAGACGTATTGGAGTCTTGGAGGAGGATTTCTGAGGATTTTTGGAGAAAAGCACAGACGAAGCGGGAAAAGACTAATTGCAATCAAGGCTGTCCAGTGGATTCTGGTCTATGGCGTCAAGCCTTCTCCAAAACGTAACTTGTTCTCTAATTCCAGCAAGAATGGGCTTAATGATGTCTCTAGCAGAAGCCATGGAGTCCTTGTGATATCTGTTTCCACTCCTTGTGATGATGGCTCCAGTGCTGTTGTTACTTGGAAGTTGAACCTCATCGATTTAGCAGGTAATGAAGACAACAGAAGAACCTGCAATGAAGGGATACGTCTCCAAGAGAGTGCTAAGATCAACCAGTCCTTATTTGTCTTATCAAATGTGATTTATGCCCTTAACAATAACAAGCCCCGAGTACCATACAGAGAAAACAAACTGACCCGGATACTGCAAGATTCCCTTGGAGGAACCAGCCGTGCATTGATGGTTGCTTGTCTAAATCCAGGAGAGTACCAAGAACCTGTTCATACGGTCAGCTTGGCTGCACGGTCGCGCCACATATCTAACTCTGTTCCATCAGCTCAAAAACAAGATACTCCAAATGTTAAACCTGACATGGAGACGAAATTGCGTGCCTGGCTTGAATCAAAAGGAAAGACAAAGAGTGCACAAAGAATGAAGGCATTTGGTTCACCTCTTATGAGCAAAGCTTCTAGTTCTTTGAGCTCTTTGAAGAAGCCCTGTCCATGTCACAGCTCCACAAAAGCAAAGGCTATTACAAACTAA 798 0.4411 MGKGDALKETYWSLGGGFLRIFGEKHRRSGKRLIAIKAVQWILVYGVKPSPKRNLFSNSSKNGLNDVSSRSHGVLVISVSTPCDDGSSAVVTWKLNLIDLAGNEDNRRTCNEGIRLQESAKINQSLFVLSNVIYALNNNKPRVPYRENKLTRILQDSLGGTSRALMVACLNPGEYQEPVHTVSLAARSRHISNSVPSAQKQDTPNVKPDMETKLRAWLESKGKTKSAQRMKAFGSPLMSKASSSLSSLKKPCPCHSSTKAKAITN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1611 265 Gene3D Kinesin motor domain 53 233 IPR036961 -
Vvi18g1611 265 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 63 196 IPR027640 GO:0003777|GO:0007018
Vvi18g1611 265 PRINTS Kinesin heavy chain signature 94 112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1611 265 PRINTS Kinesin heavy chain signature 62 79 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1611 265 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1611 265 Pfam Kinesin motor domain 61 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1611 265 SMART kinesin_4 18 199 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1611 265 ProSiteProfiles Kinesin motor domain profile. 64 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g1611 265 MobiDBLite consensus disorder prediction 238 265 - -
Vvi18g1611 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 219 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1611 Vvi-Chr18 20701222 20703355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1611 60 223 Calmodulin-binding Proteins AT5G65930 33.735 2.28e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1611 K10403 - vvi:104877678 368.237