Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1566 ATGGAGGTGTTCTTCCTCTCCCTGCTCCTCATCTGTGTGCTCTCAGTCTCCATCGGACTTCAGTTCCTCTTCTACAAGCACAGATCCCACTTCACTGGCCCCAACCTCCCCCCTGGCAGGATTGGTTGGCCTATGGTTGGTGAAAGCCTTGAATTCCTCTCCACCGGCTGGAAAGGCCACCCGGAAAAATTCATCTTCGATCGCATCTCCAAATACTCCTCTGAAGTCTTCAAGACCTCCCTCCTCGGAGAGCCTGCTGCCGTCTTTGCTGGCGCTGCGGGCAACAAGTTTTTGTTCTCCAACGAAAACAAGCTTGTTCATGCGTGGTGGCCTAGCTCCGTGGACAAGGTCTTCCCCTCCTCCACCCAAACCTCATCCAAAGAGGAGGCCAAGAAGATGAGGAAGTTGCTCCCTCGGTTCCTTAAGCCTGAAGCCTTGCAACGTTACATCGGCATCATGGATCACATTGCGCAGAGGCACTTTGCTGATAGCTGGGACAACAGAGATGAAGTCATTGTGTTTCCACTGTCCAAGAGGTTCACTTTCTGGCTAGCTTGCCGCCTCTTTATGAGCATAGAAGATCCTGACCACATCGCTAAATTTGAAAAGCCCTTCCATGTCTTGGCCTCAGGACTCATCACCGTCCCGATTGACTTGCCTGGGACACCTTTCCACCGCGCTATCAAGGCCTCCAACTTCATCAGAAAGGAGCTTAGAGCCATCATCAAGCAAAGGAAGATCGATCTGGCCGAGGGAAAAGCCTCACCAACTCAAGATATATTGTCCGACCTGCTTCTGGCCACAGATGAAGATGGACGCCACATGAACGAAATTAATATTGCTGATAAAATCCTTGGCTTGTTGATTGGTGGCCATGATACGGCCAGTTCTGCCATTACATTCATTGTTAAGTACATGGCTGAGCTGCCTCATATGTACGAGAAAGTCTACGAAGAGCAAATGGAAATTGCCAATTCAAAAGCACCAGGTGAATTATTGAACTGGGATGATGTTCAAAAGATGAGATATTCATGGAATGTTGCTTGTGAAGTGATGAGACTTGCACCCCCACTCCAAGGAGCTTTCCGAGAAGCAATCACTGACTTCGTGTTCAATGGTTTCTCCATTCCTAAGGGTTGGAAGTTGTACTGGAGCACAAGCTCAACCCACAAAAGCCCAAAATGCTTCCCTGAACCTGAAAAATTTGACCCTACAAGATTTGAAGGAGCTGGGCCTGCTCCTTACACATTCGTTCCCTTTGGTGGTGGACCTAGGATGTGCCCTGGTAAAGAGTACGCCCGCTTGGAAATACTTGTCTTCATGCATAACGTGGTTAAAAGGTTCAAATGGGATAAATTGCTTCCTGATGAGAAGATAATAATTGACCCCATGCGCATGCCTGCTAAGGGACTTCCAGTTCGCCTCCGTCTTCACAAACCATAA 1443 0.4865 MEVFFLSLLLICVLSVSIGLQFLFYKHRSHFTGPNLPPGRIGWPMVGESLEFLSTGWKGHPEKFIFDRISKYSSEVFKTSLLGEPAAVFAGAAGNKFLFSNENKLVHAWWPSSVDKVFPSSTQTSSKEEAKKMRKLLPRFLKPEALQRYIGIMDHIAQRHFADSWDNRDEVIVFPLSKRFTFWLACRLFMSIEDPDHIAKFEKPFHVLASGLITVPIDLPGTPFHRAIKASNFIRKELRAIIKQRKIDLAEGKASPTQDILSDLLLATDEDGRHMNEINIADKILGLLIGGHDTASSAITFIVKYMAELPHMYEKVYEEQMEIANSKAPGELLNWDDVQKMRYSWNVACEVMRLAPPLQGAFREAITDFVFNGFSIPKGWKLYWSTSSTHKSPKCFPEPEKFDPTRFEGAGPAPYTFVPFGGGPRMCPGKEYARLEILVFMHNVVKRFKWDKLLPDEKIIIDPMRMPAKGLPVRLRLHKP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1566 480 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 Pfam Cytochrome P450 37 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Vvi18g1566 480 SUPERFAMILY Cytochrome P450 28 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 Gene3D Cytochrome P450 26 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 FunFam Taxadiene 5-alpha hydroxylase 27 478 - -
Vvi18g1566 480 CDD CYP90-like 68 475 - -
Vvi18g1566 480 PANTHER CYTOCHROME P450 26 36 466 - -
Vvi18g1566 480 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1566 480 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1566 Vvi-Chr18 19797966 19801580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1566 26 382 Cytochrome P450 AT5G36110 60.278 1.70e-155 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1566 K20667 - vvi:100262400 976.081