Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1558 ATGCTTGTAGTCTTCTTCACTTCTTTCCTTACCCTACTCTTCCAACTCTCTCTTTCCACAACAGTGGTAGTTGATGGAGTTTCTGAATGGAAAAACCCTATTGTTCATGTTGGAGATTCTATCATTTTCAGACATAGGAATCATTATAATCTCTATGTTTTCCAGAACAGAGAAGCCTTCAATCTCTGTAACTTCACTCAAGCCACACTCCTCACCAAACCCAACTCCACCTCTTACACGTGGCACCCATCACGGACTGGCTTCTTCTACTTCTCCTTCAACAATGGCTCTCTCGAAGCATGCCAACAAGCTCAAAAGCTCGCCATAAAGGTGCAGGCCTCTGCAAAGCCGCGGGACAACTGGGCTACTTCGCCGGCGCTACCTCCAAGGGCGGCTCCTGCGCCGACTTCCGGAGGCACGCCAACGTCGTCTCCGGTGTATCCATGGCCATTCCGCCCTCATGAGGCGGCTCCATCGAGTGCAGAACCCAGTGCGAGTCCTCCAGCGACGGTGATGCCGGACAAAGGCGCCGGCATACCGTTTATCAATAGTAATCCGGCGGTTCCTCTGCCGACCGGCGAAGTGGACTCTGCTACCATACGCCCTGTGCCCACTTCTGGCCATGGAGGGTTGGTGCAGGTGAAAGTGGTGCAATTTGCAGCTCAAATGAGTGTGGTATGTGTGGTTTTGGTGATGCTGTAA 702 0.5214 MLVVFFTSFLTLLFQLSLSTTVVVDGVSEWKNPIVHVGDSIIFRHRNHYNLYVFQNREAFNLCNFTQATLLTKPNSTSYTWHPSRTGFFYFSFNNGSLEACQQAQKLAIKVQASAKPRDNWATSPALPPRAAPAPTSGGTPTSSPVYPWPFRPHEAAPSSAEPSASPPATVMPDKGAGIPFINSNPAVPLPTGEVDSATIRPVPTSGHGGLVQVKVVQFAAQMSVVCVVLVML* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1558 233 SUPERFAMILY Cupredoxins 19 112 IPR008972 -
Vvi18g1558 233 Gene3D - 18 114 IPR008972 -
Vvi18g1558 233 PANTHER OS04G0422700 PROTEIN 2 231 - -
Vvi18g1558 233 MobiDBLite consensus disorder prediction 119 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1558 Vvi-Chr18 19689715 19690805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1558 10 138 Phytocyanin Superfamily AT2G25060 31.126 7.95e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1558 - - vvi:100257188 426.017