Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1541 ATGAGATTGATTTTAGAGGAGGGTAGATCTACTTTAAGAACAATGCTGAAAACCCGGCCAAAAAGTAATGGTTTCCCAATCCATTTTTCAAACTGGAAGCTTACTACTGCCCAAGCAAAGAGACTCCATTTAGCAAGGAGGACTAGACCTCCACACCTTGAACTAATAACAATGGCCGGAGTGAAGCTACTGGGATTCTGGGCAAGCCCTTTTAGTCACAGAGTAATATGGGCTCTAAAACTGAAGGGCGTGAGCTATGAGTATATAGAAGAAGACCTATCCAACAAGAGCCAATTGCTGATACATAACAACCCAGCTGATAAGCAGATCCCTGTGCTTATTCATGGTGACAAAGCAGTCGCAGAGTCTCTTGTTATCCTTGAATACATCGATGAAACCTGGCCACACAATCCATTGCTGCCAAAAGGGGCTTATGAGAGAGCAACAGCCCGGTTTTGGATCAAATTTGCAGTAGAAAAGGGTGCCACTTTCTACGCATTCTATAACTCCAATACTGGAGAAGAACAAGAGAAAGCTACAAAAGAAACCGTGGAAGTGCTGAAAATCATTGAAGAAGAAGCCCTTGGGGATGAGAAGTTTTTCGGGGGTGAGGATATAGGATTGTTAGACCTGGTGTTGGGATGGTTTGCTCACTGGTTTGATATCATAGAAGAACTGGTGGGTGTGAAAGTGCTGGACGCCTCCAAATTGCCCCGCCTGCATGCATGGACTGAGAATTTTAAGGAAGTTCCTGTGATCAAAGAAAATCTTCCTGATCGCAGCAAACTCTTGGCCTACTTCAAACACAAGTATTTTGCCCACCTTCCAAGTCTAGACAATTAG 843 0.4389 MRLILEEGRSTLRTMLKTRPKSNGFPIHFSNWKLTTAQAKRLHLARRTRPPHLELITMAGVKLLGFWASPFSHRVIWALKLKGVSYEYIEEDLSNKSQLLIHNNPADKQIPVLIHGDKAVAESLVILEYIDETWPHNPLLPKGAYERATARFWIKFAVEKGATFYAFYNSNTGEEQEKATKETVEVLKIIEEEALGDEKFFGGEDIGLLDLVLGWFAHWFDIIEELVGVKVLDASKLPRLHAWTENFKEVPVIKENLPDRSKLLAYFKHKYFAHLPSLDN* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1541 280 Pfam Glutathione S-transferase, N-terminal domain 61 132 IPR004045 -
Vvi18g1541 280 FunFam Tau class glutathione S-transferase 56 142 - -
Vvi18g1541 280 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 143 272 IPR010987 -
Vvi18g1541 280 CDD GST_N_Tau 61 134 - -
Vvi18g1541 280 Gene3D - 143 275 - -
Vvi18g1541 280 SFLD Main (cytGST) 58 270 - -
Vvi18g1541 280 SUPERFAMILY GST C-terminal domain-like 132 269 IPR036282 -
Vvi18g1541 280 CDD GST_C_Tau 144 268 IPR045074 GO:0004364|GO:0006749
Vvi18g1541 280 Pfam Glutathione S-transferase, C-terminal domain 178 245 - -
Vvi18g1541 280 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 59 138 IPR004045 -
Vvi18g1541 280 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 63 263 IPR045073 -
Vvi18g1541 280 Gene3D Glutaredoxin 57 142 - -
Vvi18g1541 280 SFLD Main.3: Omega- and Tau-like 58 270 IPR045073 -
Vvi18g1541 280 SUPERFAMILY Thioredoxin-like 61 157 IPR036249 -
Vvi18g1541 280 FunFam Tau class glutathione S-transferase 140 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1541 Vvi-Chr18 19496010 19497154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1541 61 270 Glutathione S-transferase Gene Family AT2G29420 46.667 2.97e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1541 K00799 - vvi:100253876 458.373