Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1523 ATGGCTGCTTCTTCTTCTTCTTCTTCTTCTTATTCGACATCTCATCTTCTGCTCTTAGTTGGGTCCTGTCTTTTGCTGGTTTCCTACTTTGCTGTTTCAGAGGCTTACACTACCCCACATCTGGTGAAGGGTCTGTCGTGGAGCTTCTATAAAAACTCATGTCCAAAAGTGGAGTCCGTCATCAGAAGGCACCTCAAGAAGGTGTTCAAGAAGGATATCGGCAACGCCGCTGGCTTGCTTCGCCTCCACTTTCATGACTGCTTTGTTCAGGGATGTGATGCCTCAGTGTTGCTAGATGGCTCAGCAAGTGGTCCTGGTGAACAAGAAGCCCCTCCAAACCTGAGCTTGAGAGCCGCAGCATTTCAGATCATCGACGAGCTCCGCGAGCTGGTCGATGAGGAGTGTGGCACTGTTGTTTCCTGCGCTGACATCGTCGCCATCGCCGCCCGTGACTCCGTCCACCTGTCAGGAGGACCCGACTATGATGTCCCCTTGGGAAGGAGAGATGGACTCAACTTTGCCTCAAGAGACGCAACAGTAGCTAACCTACCTTCACCCAACACCAATGCCAGCACCCTTATTGAATTTCTCGCCACCAAAAACTTGGATGCCACAGACCTTGTGGCCCTCTCCGGTGGCCACACCATTGGGCTCGGCCACTGCAGCTCCTTCACCAGCCGTCTCTACCCTACCCAAGACCCAACCATGGAGGAAAAGTTTGCCAATGACCTCAAGGAGATTTGTCCCGCATCAGACACCAATGCCACCACGGTGCTGGACATCAGGACTCCCAACCATTTCGATAACAAGTACTACGTCGATCTGGTGCACCGACAGGGCCTGTTCACTTCAGACCAAGACTTGTACTCATATGAAAAGACTCGCGGCATTGTTAAGAGCTTTGCGGAGGATGAGGCTTTGTTCTACGAAAAGTTTGTGCATGCTATGCTGAAGATGGGGCAGCTGAGCGTGTTGACGGGCAAGAAGGGTGAAATTCGTGCTAACTGCTCGGTGAGGAACTCCGATAACATCCAACTGAAGACAGTGGTGGAAGAGGACAAGGAAGCTTCTGCTGAACTTTAA 1083 0.5162 MAASSSSSSSYSTSHLLLLVGSCLLLVSYFAVSEAYTTPHLVKGLSWSFYKNSCPKVESVIRRHLKKVFKKDIGNAAGLLRLHFHDCFVQGCDASVLLDGSASGPGEQEAPPNLSLRAAAFQIIDELRELVDEECGTVVSCADIVAIAARDSVHLSGGPDYDVPLGRRDGLNFASRDATVANLPSPNTNASTLIEFLATKNLDATDLVALSGGHTIGLGHCSSFTSRLYPTQDPTMEEKFANDLKEICPASDTNATTVLDIRTPNHFDNKYYVDLVHRQGLFTSDQDLYSYEKTRGIVKSFAEDEALFYEKFVHAMLKMGQLSVLTGKKGEIRANCSVRNSDNIQLKTVVEEDKEASAEL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1523 360 Pfam Peroxidase 62 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 Gene3D Peroxidase, domain 2 185 320 - -
Vvi18g1523 360 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 Gene3D - 49 337 - -
Vvi18g1523 360 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
Vvi18g1523 360 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
Vvi18g1523 360 FunFam Peroxidase 184 319 - -
Vvi18g1523 360 PANTHER - 35 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 ProSiteProfiles Plant heme peroxidase family profile. 44 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g1523 360 FunFam Peroxidase 48 195 - -
Vvi18g1523 360 CDD secretory_peroxidase 44 338 IPR033905 GO:0004601|GO:0042744
Vvi18g1523 360 SUPERFAMILY Heme-dependent peroxidases 40 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1523 Vvi-Chr18 19199721 19202326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1523 8 360 Peroxidase AT1G71695 60.335 4.77e-159 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1523 K00430 - vvi:100854817 702.205