Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1473 ATGGCAGCTATGCAACACTCTCCGGTCACGTTCCAGTCCAGATCCCCACCATCGGCGGCCAAAAGCCTATCGAACAAGCCGCTGAACCTCTCATTCTCTGGCAACTTCCCCTCCTTCAGGCTGACCAACAAAGTTGCTGGGAAATCTCGATCCGGCGCCTCCTCCGCTAGAATGTCCGCCACCGCTGCCGGAAGCTACGCAACCGCCCTCGCCGACGTCGCGAAGTCCAACGGAACCCTAGACACCACCGCGGAAGACGTTGAGAAAATTGAAAAAGTCTTGTCCGATGAACAGGTACTGGGTTTCTTCTGCAACCCTACGATTGATATCGAGAAGAAACGCAACGTTTTGGACGAGATAGCGAAGACATCGGGCATCCAACCACACACCATGAACTTCCTGAACATCCTGGTGGACATGAAGCGAATCGATTTGATAAAAGAGATAGCGAAGGAGTTCGAATTGGTGTACAACCGGCTGACGGATACGGAGTTGGCAGTGGTGAGCTCGGTGGTGAAACTGGAGTCGGAGCACTTGGCGCAGATAGCGAAGCAAGTGCAGAAGCTGACTGGCGCCAAGAATGTGAGAATCAAGACGGCGATCGATCCGAGCTTGGTGGCTGGCTTCACAATCAGGTATGGAAGTGGCGGTTCCAAATTGATTGATATGAGCGTGAAGAAACAGCTTGAGGAAATTGCTGCTGAGCTGGAGTTGGGGAATATTCAACTGGTTTGA 735 0.5252 MAAMQHSPVTFQSRSPPSAAKSLSNKPLNLSFSGNFPSFRLTNKVAGKSRSGASSARMSATAAGSYATALADVAKSNGTLDTTAEDVEKIEKVLSDEQVLGFFCNPTIDIEKKRNVLDEIAKTSGIQPHTMNFLNILVDMKRIDLIKEIAKEFELVYNRLTDTELAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTAIDPSLVAGFTIRYGSGGSKLIDMSVKKQLEEIAAELELGNIQLV* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1473 244 NCBIfam ATP synthase F1 subunit delta 63 236 IPR000711 GO:0015986|GO:0046933
Vvi18g1473 244 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 59 161 IPR026015 -
Vvi18g1473 244 Pfam ATP synthase delta (OSCP) subunit 63 236 IPR000711 GO:0015986|GO:0046933
Vvi18g1473 244 Hamap ATP synthase subunit delta [atpD]. 58 238 IPR000711 GO:0015986|GO:0046933
Vvi18g1473 244 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 195 214 IPR020781 GO:0015986|GO:0016020|GO:0046933
Vvi18g1473 244 PANTHER ATP SYNTHASE DELTA CHAIN 46 237 IPR000711 GO:0015986|GO:0046933
Vvi18g1473 244 Gene3D - 62 154 IPR026015 -
Vvi18g1473 244 PRINTS ATP synthase delta subunit signature 142 156 IPR000711 GO:0015986|GO:0046933
Vvi18g1473 244 PRINTS ATP synthase delta subunit signature 193 208 IPR000711 GO:0015986|GO:0046933
Vvi18g1473 244 PRINTS ATP synthase delta subunit signature 131 142 IPR000711 GO:0015986|GO:0046933
Vvi18g1473 244 PRINTS ATP synthase delta subunit signature 62 81 IPR000711 GO:0015986|GO:0046933
Vvi18g1473 244 PRINTS ATP synthase delta subunit signature 211 229 IPR000711 GO:0015986|GO:0046933
Vvi18g1473 244 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1473 1 243 Primary Pumps ATPases AT4G09650 62.140 7.82e-103 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1473 K02113 - vvi:100251062 434.491