Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g1465 | ATGGCCCAAGGTTTGATCTCATTGGCAAAACAACCCGCGTTTCAGGATTCTGTTGGAATTGAGTTTAATGTTGACCTCTTTAAGGTGCGCCATGAGTCTACAATAAGTACTTTATATGATGATATGTCAAGACAGTGCATAACATGTGGCTTTCAATTCAAGTGCCAAGAAGAGCATATTAGTCATATGGATTGGCACGTGACCAAGAACTAG | 213 | 0.4038 | MAQGLISLAKQPAFQDSVGIEFNVDLFKVRHESTISTLYDDMSRQCITCGFQFKCQEEHISHMDWHVTKN* | 71 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1465 | 70 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 46 | 66 | IPR013087 | - | |
| Vvi18g1465 | 70 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 1 | 70 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1465 | 1 | 70 | C2H2 Transcription Factor Family | AT4G04885 | 67.143 | 1.40e-31 | 112 |