Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1453 ATGGTGCCACTCCGGCAGCCCCCTCCATCTTCGTCACCGCCACCAACTTCTGCCCGCCTGACTACGCTCTTCCCAGCGACAATGGCGGCTGGTGCAACTCTCCTTGTCCCCACTTCAACCTTGCCATGCTCGTGTTTCTCAAGATCGCCGGGTACCGGGCCGGAATTGTCCCCGTTGCTTTCCGTCGGGTACCCTGCTGAAAGAGTGGCTGCTTGTAGAGCTGGTTCAGCTATCCCGCTGTCCACTGATCACAAACCTGACAGATCTGATGAACGTCAAGGGATTGAAAATGCTGGAGGGAGGGAGGGAAAGAGCATTTGA 321 0.5701 MVPLRQPPPSSSPPPTSARLTTLFPATMAAGATLLVPTSTLPCSCFSRSPGTGPELSPLLSVGYPAERVAACRAGSAIPLSTDHKPDRSDERQGIENAGGREGKSI* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1453 106 MobiDBLite consensus disorder prediction 77 106 - -
Vvi18g1453 106 SUPERFAMILY PP2C-like 68 101 IPR036457 -
Vvi18g1453 106 MobiDBLite consensus disorder prediction 83 106 - -
Vvi18g1453 106 Pfam Protein phosphatase 2C 72 102 IPR001932 -
Vvi18g1453 106 Gene3D - 68 105 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1453 Vvi-Chr18 17801072 17801476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1453 68 100 PP2C-type Phosphatase Gene Family AT1G43900 78.788 1.16e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1453 K17506 - vvi:104879041 155.606