Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1448 ATGGTGGGTGCATCGAGCTCATGGTCTCGCGCATTGGTTCAGATCTCACCCTCCACTTTCTCCGTCATCGGTATCGCCATCGGCATCGGCGTTTCCGTCTTGGGTGCCGCTTGGGGAATTTATATAACTGGAAGTATTTTAATTGGTGCCATCAAAGCTCCTCGGATTACTTCAAAAAATCTGATTAGATGA 192 0.4792 MVGASSSWSRALVQISPSTFSVIGIAIGIGVSVLGAAWGIYITGSILIGAIKAPRITSKNLIR* 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1448 63 SUPERFAMILY F1F0 ATP synthase subunit C 17 61 IPR035921 -
Vvi18g1448 63 Gene3D - 18 63 IPR035921 -
Vvi18g1448 63 FunFam V-type proton ATPase subunit c''1 18 63 - -
Vvi18g1448 63 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 5 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1448 Vvi-Chr18 17732154 17732517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1448 2 62 Primary Pumps ATPases(2) AT4G32530 80.645 9.93e-25 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1448 K03661 - vvi:100253217 100.523