Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1434 ATGGAGGATGGTGCTGACCTTGGCTTATCAGAGCTTGGAGCAGATAATAATGGTGAAGGTGGGACTTTTACTTTGTATTCATTACTCTGCCGGCATGCCCGGATGAACTCAATACCCAATTGCCAGCTTACTGATGAGGAACTGTTCGAATACACAAGGGACGATTTTGTATTGCTCGACAAAAATTCCGGTTCAAGCCTGAAATCGACATTGGAGAAGTATAGAGCGTTGCAGAGGTGTCGGGTTTAG 249 0.4538 MEDGADLGLSELGADNNGEGGTFTLYSLLCRHARMNSIPNCQLTDEELFEYTRDDFVLLDKNSGSSLKSTLEKYRALQRCRV* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1434 82 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 79 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1434 Vvi-Chr18 17510947 17511365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1434 12 79 Inorganic Solute Cotransporters AT1G70300 59.155 1.05e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1434 K03549 - vvi:100243919 123.635