Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1423 ATGGTTGGAAGCGCTCTATTCGAGGCGATGTCGGGGGATTTGGGCGGAAAGGTCGAGATCTTGTCGGAGGATTTTGATCCCACGGCTGTGGTGGTGGAGCCGGTGCCGCCGGTGGTGGAGAACGGTGGGGAGATGGGAAGAGAAGAGGAGGAGAAGAGGAGCAAAGAGATTGTGCTTGGGCGAAACGTGCACACCACGTGCCTTGCCGTCACGGAGCCCGATGCCAATGACGAATTTACTGGTGATAAGGAGGCTTATATGGCTAGTGTGTTGGCTAGGTATCGGAAGACTCTGATGGAAAGAACGAAGCACCATTTAGGTTATCCATATAATCTGGATTTCGACTATGGTGCTCTGTCACAGTTGCAACATTTCTCCATCAATAATCTTGGTGATCCATTTATTGAGAGTAACTATGGTGTCCATTCGAGACAGTTTGAAGTTGGTGTTTTGGATTGGTTTGCCCGTCTATGGGAAATAGAAAAAGATGAATACTGGGGGTACATCACTAATTGTGGCACAGAAGGCAATCTTCATGGAATCTTAGTCGGGCGAGAAGTGCTTCCTGATGGGATTCTCTATGCATCACAAGAGACACATTATTCTGTCTTTAAAGCAGCACGGATGTATAGAATGGAATGTGTGAAGGTTGCCACTTCACTTTCGGGGGAGATTGATTGTGCAGATTTTAAGGCTAAACTACTGGCTAACAAGGACAAACCAGCCATCATTAATGTTAACATAGGAACAACTGTCAAGGGAGCCGTAGATGACCTTGATCTTGTAATAGAGACTCTCGAAGAATGTGGGTTTACACATGATCGGTTCTATATTCACTGTGACGGAGCTCTATTTGGACTCATGATGCCTTTTGTCAAACGCGCACCAAAGGTAACTTTCAAGAAACCCATAGGAAGTGTGAGTGTCTCTGGCCACAAGTTTGTGGGCTGTCCAATGCCTTGTGGCGTTCAGATAACAAGGATGGAGCATATCAATGCGCTCTCAAGGAATGTGGAGTACCTGGCTTCAAGGGATGCCACAATTATGGGTAGCCGGAATGGCCATGCTCCAATCTTTCTCTGGTACACTCTGAACAGGAAAGGTTACAAGGGTTTCCAGAAAGAAGTTCAGAAGTGCCTTAGAAATGCTCACTACTTGAAGGACCGCCTCCGAGATGCTGGAATCAGTGCCATGCTTAATGAGCTCAGCAGCACGGTTGTGTTTGAACGGCCCGTTGATGATGAGTTTGTCCGCAGGTGGCAACTTGCATGCCAGGGGAATATTGCGCATGTTGTGGTTATGCCCAATGTCACCATTGAGAAGCTGGACTATTTCTTAGATGAGCTGATTGAAAAGCGAAACACTTGGTTTCTGGATAAAAAAGTTCAACCTCCTTGTGTTGCAGCAGACATAGGGAGTGAGAATTGTTTGTGTGATCTGCATAAGTGA 1449 0.4658 MVGSALFEAMSGDLGGKVEILSEDFDPTAVVVEPVPPVVENGGEMGREEEEKRSKEIVLGRNVHTTCLAVTEPDANDEFTGDKEAYMASVLARYRKTLMERTKHHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKDEYWGYITNCGTEGNLHGILVGREVLPDGILYASQETHYSVFKAARMYRMECVKVATSLSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIETLEECGFTHDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLRDAGISAMLNELSSTVVFERPVDDEFVRRWQLACQGNIAHVVVMPNVTIEKLDYFLDELIEKRNTWFLDKKVQPPCVAADIGSENCLCDLHK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1423 482 Gene3D Aspartate Aminotransferase, domain 1 365 454 IPR015422 GO:0003824
Vvi18g1423 482 SUPERFAMILY PLP-dependent transferases 88 451 IPR015424 -
Vvi18g1423 482 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 306 327 IPR021115 GO:0016831
Vvi18g1423 482 Pfam Pyridoxal-dependent decarboxylase conserved domain 192 405 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vvi18g1423 482 Gene3D - 120 364 IPR015421 GO:0003824
Vvi18g1423 482 PANTHER - 45 482 - -
Vvi18g1423 482 FunFam Serine decarboxylase 1 121 364 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1423 205 388 Calmodulin-binding Proteins AT1G65960 25.389 4.52e-08 53.1