Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1418 ATGGAATCCAACCAACCATCTCTCCATGATCCCAAATTCACAGTCCCCATCAGCGATGTGGAGCAACAAGCCAGCCAGCTTGAGAATGAAGCCAAGGAATTCGACTACTCAAAACGCTCGCAATGGTTAAGGGCCGCCGTCCTAGGAGCCAATGATGGGCTGGTCTCCACCGCGTCGTTAATGATGGGGGTCGGAGCCGTGAAGCAAGACATCAAGGCCATGATACTAACCGGGTTCGCTGGCTTGGTGGCCGGGGCTTGCAGCATGGCCATAGGAGAGTTTGTATCGGTGTACTCACAGTTGGACATAGAAGTGGCCCAACGGAAGAGAGATAAGAGGAGGGTAGGCAGTGGAGAGAGTGAAGAAGAAGAGGGTGAGAAGGAGAACCTCCCCAACCCAGTACAAGCTGCAGCAGCATCTGCCCTAGCATTTGCAGTGGGAGCCATGGTGCCATTGCTAGCTGCATCATTTATAAGGGAGTATAAGGTAAGGCTAGGAGCGGTGATTGCAGCTGTGACGGTAGCTTTGGTTGTGTTTGGATGGTTAGGAGCAGTGTTGGGGAAGGTACCAGCTTTTAGGTCTTGTATGAGGGTTTTGGTTGGGGGATGGCTGGCCATGGCTATAACTTTTGGACTAACCAAGCTGATTGGCTCAAGTGGGCTGTGA 666 0.524 MESNQPSLHDPKFTVPISDVEQQASQLENEAKEFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQRKRDKRRVGSGESEEEEGEKENLPNPVQAAAASALAFAVGAMVPLLAASFIREYKVRLGAVIAAVTVALVVFGWLGAVLGKVPAFRSCMRVLVGGWLAMAITFGLTKLIGSSGL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1418 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 21 216 IPR008217 GO:0005384|GO:0030026
Vvi18g1418 221 Coils Coil 17 37 - -
Vvi18g1418 221 Pfam VIT family 43 123 IPR008217 GO:0005384|GO:0030026
Vvi18g1418 221 Pfam VIT family 123 213 IPR008217 GO:0005384|GO:0030026
Vvi18g1418 221 MobiDBLite consensus disorder prediction 112 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1418 Vvi-Chr18 16184538 16185203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1418 1 221 Nodulin-like Gene Family AT3G43660 66.063 2.20e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1418 K22736 - vvi:100263270 395.586