Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1331 ATGGTGCCATCCGGGCCACCCACTCCTATAGGTGGAGCCCAACCTGTTCCCCCTTCACTTTTGCGTTCGAATTCTGGTATGTTAGGAGCTCAGGCGGGTCCTGTGCCACCCCAAACAGGGTTCCCTTCGCTTGTGTCTCCAAGAACTCAGTACAATAATATGAATTTACTTGGAAATGTACCCAGTGTTTCTTCACTGCTCAGTCAGTCTTTTGGAAACGGGGGTTCAAACCCTGGGCTTTCTGGTCCAGGAAGTGGTCAGCGTGGAGGTATTGATGCTGGTGCTGAATCTGATCCACTCTCTGGTGTTGGAAATGGATTGGGTTTCACTCCTCCGGCATCATTTGTTCCGACCAACATGGCGAACCCTGGTTCGGCTGGTCAGGGACAACAGTTCCAAAACCCTTCTGGAAACCAGATGTTGCCAGATCAACAGCAGTCTCAACAACTTGAAGCACAAAATTTCCAGCATGGCCAACAGCCATTGCAACAGTTCTCCGCCCCACTCAACACTCAGCAACAGCAGCAATACCAATCAATTCGAGGTGGGCTAGGTGGTGTTGGACCTGTTAAGCTAGAGCCCCAGGTGACCAATGATCAACATGGACAACAGCAGCAGTTGCAGTCCTTGAGAAATATTGGTCCAGTGAAACTGGAGCCACAACAAATTCCAACTATGAGAAGCTTGGCACCTGTCAAAATGGAACCCCAACATTCTGATCAGTCATTGTTTCTGCACCAACAGCAGCAACAGCAACAGCAGCATCAGCAACAACAGCATCAGCAACAACAGCAGCAGTTCCTGCATATGTCAAGGCAGTCTTCGCAGGCTACTGCTGCGCAGATTAGTCTTTTGCAACAACAAAGATACATGCAGCTACAACAACAGCAGCAACAGCAACTTTTGAAGGCTATTCCTCAGCAACGGTCCCAACTACAACAACAGCAATTTCAAGCGCAGAATTTGCCTTTGAGATCTCCTGTGAAACCAGGATATGAACCTGGGATGTGTGCCCGGCGGCTGACATATTACATGTATCAGCAACAACACAAACCCACTGACAACAATATTGAATTCTGGAGAAAGTTTGTTGCTGAGTATTTTGCTCCGCATGCCAAGAAGAAGTGGTGTGTTTCTATGTATGGAAGTGGCCGACAAACAACTGGAGTTTTTCCTCAGGATGTGTGGCACTGTGAGATATGCAACCGCAAGCCAGGACGAGGTTTTGAAGCGACTGTGGAGGTTCTGCCCAGGCTTTTCAAAATCAAGTATGAAAGTGGTACTCTGGAAGAACTTCTTTATGTTGATATGCCCCGTGAGTATCAAAATTCGTCTGGGCAAATTATCCTGGACTATGCAAAAGCAATACAGGAAAGCGTCTTTGAACAGCTTCGAGTCGTTCGTGAAGGTCAACTTCGGATAGTTTTCTCACCTGACTTGAAGATTTGCTCGTGGGAGTTCTGTGCTCGACGTCATGAGGAGCTTATCCCTAGAAGATTGTTGATACCTCAGGTTAGTCAGCTTGGGGCTGCAGCTCAGAAATACCAGTCTGCTACTCAAAATGCATCATCCAATTTGTCTGTTCCAGAGTTACAAAGCAACTGTAATATGTTTGTTGCGTCAGCTCGTCAATTAGCAAAAGCTTTGGAAGTACCATTAGTAAATGATTTGGGATATACAAAGAGATATGTTCGCTGCCTTCAGATATCAGAAGTCGTTAATAGCATGAAAGACTTGATTGATTACAGTCGAAACACAGGAACTGGACCTATGGAGAGCTTGGCCAAGTTCCCGCGGAGAACAAATGCCTCATCTGGCTTTCATAACCAAGCTCAACAACCGGAGGAACAGATGCAGCAGCAACAACAACAGCAACAACAAACGATTGCTCAGAATGCAAACAATGATCCAAGTTCTGTCCAGGCCACTGCGATGCAGCTTGCTTCTAGCAATGGTGTAACTAGTGTAAATAACTCCCTCAACCCAGCATCTGCCTCTACCTCTTCCAGCACCATAGTTGGGCTTCTACACCAGAACTCCATGAACTCTAGACAGCAAAATTCTATGAACAATGCAAACAGTCCCTATGGTGGAGGTGCTGTTCAGATTCCATCCCCTGGTTCCTCCAGTTCAATACCGCAGCCTCAACCGAATCCTTCTCCATTCCAATCACCAACACCCTCTTCATCTAACAATCCCCCCCAAACTTCCCATGGTGCCTTGACAGCAGCCACTCACATGAGTACAGCAAATTCACCTGCGAATATTTCCATGCAACAGCCTTCTCTCTCTGGTGAGGCCGACCCAAGTGATTCGCAGAGCTCAGTCCAGAAAATCATTCAAGAAATGATGATGTCATCCCAACTTAATGGCACAGCGGGTATGGTGAGTGTTGGTTCTTTGGGGAATGATGTGAAAAATGTTAATGGGATTTTGCCCACAAGTAACAGCACAGGCCTTAATGGTGGTCTGGTAGGGAATGGGCCAGGAAACAGCACTCCAGGTATTGGAGGCGGTGGATTTGGCAGCATGGGTGGACTAGGGCAGTCTGCTATGGTTAATGGAATGAGAGCTGCAATGGGTAATAACTCCTTGACTATAAATGGAAGGGTGGGCATGACACCCATGACTCGGGATCAAAGCATTAATCATCAACAAGATTTGGGGAACCAGCTGCTTGGCGGGCTAGGAGCAGTTAATGGATTCAATAATCTACAGTTTGATTGGAAGCAGTCACCGTGA 2742 0.4705 MVPSGPPTPIGGAQPVPPSLLRSNSGMLGAQAGPVPPQTGFPSLVSPRTQYNNMNLLGNVPSVSSLLSQSFGNGGSNPGLSGPGSGQRGGIDAGAESDPLSGVGNGLGFTPPASFVPTNMANPGSAGQGQQFQNPSGNQMLPDQQQSQQLEAQNFQHGQQPLQQFSAPLNTQQQQQYQSIRGGLGGVGPVKLEPQVTNDQHGQQQQLQSLRNIGPVKLEPQQIPTMRSLAPVKMEPQHSDQSLFLHQQQQQQQQHQQQQHQQQQQQFLHMSRQSSQATAAQISLLQQQRYMQLQQQQQQQLLKAIPQQRSQLQQQQFQAQNLPLRSPVKPGYEPGMCARRLTYYMYQQQHKPTDNNIEFWRKFVAEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNSSGQIILDYAKAIQESVFEQLRVVREGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQSATQNASSNLSVPELQSNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRNTGTGPMESLAKFPRRTNASSGFHNQAQQPEEQMQQQQQQQQQTIAQNANNDPSSVQATAMQLASSNGVTSVNNSLNPASASTSSSTIVGLLHQNSMNSRQQNSMNNANSPYGGGAVQIPSPGSSSSIPQPQPNPSPFQSPTPSSSNNPPQTSHGALTAATHMSTANSPANISMQQPSLSGEADPSDSQSSVQKIIQEMMMSSQLNGTAGMVSVGSLGNDVKNVNGILPTSNSTGLNGGLVGNGPGNSTPGIGGGGFGSMGGLGQSAMVNGMRAAMGNNSLTINGRVGMTPMTRDQSINHQQDLGNQLLGGLGAVNGFNNLQFDWKQSP* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1331 913 MobiDBLite consensus disorder prediction 240 272 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 1 47 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 115 159 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 68 83 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 232 272 - -
Vvi18g1331 913 Coils Coil 245 266 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 181 207 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 683 739 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 601 646 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 752 776 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 683 709 - -
Vvi18g1331 913 PANTHER LIM DOMAIN-BINDING PROTEIN 38 902 IPR029005 -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 68 159 - -
Vvi18g1331 913 MobiDBLite consensus disorder prediction 710 728 - -
Vvi18g1331 913 Pfam LIM-domain binding protein 340 594 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1331 Vvi-Chr18 13446738 13457581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1331 1 909 C2H2 Transcription Factor Family AT1G43850 59.029 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1331 - - vvi:100241984 1513.43