Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1323 ATGGGAGCCACATTTCTTCTCCTAGCTCCAATTCAGCCTTTAAAAGGGCCACCACCCTCCTCCGCTTTGAAATATCAAGGGATAGCTTCTCACTCTCACAACTTCAGCTTCCCTTTGCTAGCTATTTCCACTCTTGAGATGTCTAGTGAGGGAAGAGGCAGTGCAGGCAGAGCCATGCTGCTCATCATGGTTGCAGTAATTTACTTATTGATTCAGTACTCCGCCCCAGTTCATGGAGCAACCTATACCGTTGGAGGCTCTGCTGGCTGGACCTTCAACTCCGCTAACTGGCCTAAAGGAAAGCGCTTTAGAGCCGGTGATGTGCTAGCATTTAACTATGATTCAAAGGTCCACAATGTGGTTGCGGTGAATGAGGGTGGATACAGCAGCTGCACCACTCCGGCAGGTGCCAAAGTGTATCAAAGCGGTAAGGAACAGATAAAGCTGGTGAAGGGACAGAACTTCTTCATATGCAACTATGCTGGCCACTGTGAGTCTGGGATGAAGATTGCTGTGAATGCAGTCTAA 528 0.4867 MGATFLLLAPIQPLKGPPPSSALKYQGIASHSHNFSFPLLAISTLEMSSEGRGSAGRAMLLIMVAVIYLLIQYSAPVHGATYTVGGSAGWTFNSANWPKGKRFRAGDVLAFNYDSKVHNVVAVNEGGYSSCTTPAGAKVYQSGKEQIKLVKGQNFFICNYAGHCESGMKIAVNAV* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1323 175 PANTHER BLUE COPPER PROTEIN 66 173 IPR039391 GO:0009055
Vvi18g1323 175 Pfam Plastocyanin-like domain 90 168 IPR003245 GO:0009055
Vvi18g1323 175 SUPERFAMILY Cupredoxins 80 174 IPR008972 -
Vvi18g1323 175 CDD Plantacyanin 80 174 IPR041844 -
Vvi18g1323 175 ProSiteProfiles Phytocyanin domain profile. 80 175 IPR003245 GO:0009055
Vvi18g1323 175 Gene3D - 80 175 IPR008972 -
Vvi18g1323 175 FunFam basic blue protein-like 80 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1323 Vvi-Chr18 13365867 13366663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1323 81 175 Phytocyanin Superfamily AT1G17800 41.837 1.31e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1323 - - vvi:100248861 265.774