Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1285 ATGAAAGTCCTTTCTGTTTCCTTTTTCCTCTTCCTTTTCCTTCTCTCGCCTCTGAGAGAAACTAGAGCAGATGAAATGAAGAACGATCGAATTTATATCGTGTACATGGGAGCTGCTACTTCATCAGAAGGCTCCTACAGATATGACCATGCCCAGATTCTGAGCTCTCTGTTGAAAAGGAAAGCAAATGCTCTGGTGCACAGCTACAGACATGGATTCTCCGGATTCGCGGCACATTTAACGGAGGAGGAGGCCCGCTCAATTGCTCAGAAACCTGGAGTGGTATCAGTATTTGAAGATCCTGTCTTGCAACTTCATACAACTCGTTCATGGGATTTCTTACACTACCAAACTGATCTAGAGACTGACTCCAAACCCGGTTCTGATGGTGACTCCCAATCTAGTGGACAAGCTGACACCATCATTGGCATCTTGGATACAGGAATTTGGCCTGAGTCTGAGAGCTTTAGCGACAAGACCATGGGCCCGGTTCCCTCGCGCTGGAGAGGGACATGCATGGAAAGCAATGATGTCGACTCCTTTAAATGCAACAGGAAGCTGATCGGAGCAAGGTATTACAACGACTCTGATGCTGCATCTGCAGTGCCTCACACGGCCAGGGACATGATCGGGCATGGTACACATGTGGCCTCAACTGCAGCTGGAAATTCTCTTCCAGACGTATCGTACTATGGCCTAGCTTCAGGGACCGCCAAGGGTGGATCGCCCGGCTCAAGGATCGCCATGTATAGAGTTTGTACGTTCTTTGGGTGTCGTGGATCATCTATTCTAGCTGCATTTGATGATGCAATTTCAGACGGGGTCGATGTGCTATCGCTGTCTCTAGGTTCATCAGCTGTGTTTGAGCTTGAATTCTCCACTGACCCAATTGCCATTGGAGCCTATCACGCCGTTGCGAAAGGGATCACGGTAGTGTGCTCCGCAGGCAATGACGGCCCCAGCCCTCAAACTGTAGTGAACATTGCTCCCTGGATTTTGACCGTGGGTGCCACCACCATTGACAGGGACTTCGAGTCTGATGTTGTTTTGGGAGGAAACAAAGTGATTAAGGGTGAAGGCATAAATTTTGCTAATATAAAAAAATCTCCAGCGTATCCATTGATATATGGCAGTTCAGCCAAGTCAAATTCCAGCAAGGTGGATGATGCAAGAAACTGTAAGCCAAATTCATTAGGTGAAGACAAGATCAAGGGGAGGATTGTTCTGTGTGACAATGATGACGGAGAATACACCCAGACAGAGAAGCTGGAGGAAGTGAAGCGCCTTGGAGGGGTTGGATTAATTTTGATTGAGGATGAAACAAGAGCAGTGGCTTCTAGATATGGAGCTTTTCCATTGACTGTCATCACTTCAAAGGATGCTTCAGAGATCCTATCCTATATCAATTCCACCAGGAACCCAGTCGCGACAATTCTAGCTACTGTATCAGTGGAACAATATAAACCAGCACCTGCTGTGGCCTACTTCTCATCCAGAGGTCCTTCGTATGCCACAAAGAACCTTCTCAAGCCTGATATTGCAGCACCAGGAGTGAACATTCTTGCAGCATGGATTGGCAATGACACAGCAGAGGCTCCGGCAGGGAAGGAGCCCCCACTATTCAATTTGCTCTCAGGAACTTCCATGGCATGCCCGCATGTTTCTGGAATAGCTGCTACAGTCAAATCCCAAAACCCCTCATGGAGCCCCTCTGCAATAAGATCGGCCATTATGACAACAGCAACTCAAAAGAACAATCTGAAAGCCCCAATAACCACACACTCAGGATCAGTAGCCACACCTTACGACTATGGTGCAGGGGAAGTAAGCCCATCTGGACCCTTACAGCCAGGGCTGGTTTATGAGACTGACACTGCTGACTACTTGCAATTTCTCTGCAACCATGGGTATGATATATCAAAAATAAAACTTATCTCACCAACTCTTCCTGATGGATTCACTTGCCCCAAGAACGCCAATGCTGATCTAATCTCCAATATGAATTATCCATCAATAGCCATCTCCAAATTCAACGGAAATGAGAGCAAGAAGGTAAGCAGAACTGTTACAAATGTTGGCAGTGATGATGAAACTCAGTATACTGTAAGCGTGAGTGCAGCTGCTGGCGTGGATGTGAAAGTGATACCTGATACATTGAAATTTACAAAGAATAGTAAGAAGCTGAGCTACCAAGTGATTTTTTCATCCAATGGATCTTCCTCGGTGAAGGGAGCTGTGTTTGGGTCAATTACCTGGACTAATGGCAAGCATAAAGTTAGGAGTCCGTTTGTTGTAAGCAGTGATTGA 2307 0.466 MKVLSVSFFLFLFLLSPLRETRADEMKNDRIYIVYMGAATSSEGSYRYDHAQILSSLLKRKANALVHSYRHGFSGFAAHLTEEEARSIAQKPGVVSVFEDPVLQLHTTRSWDFLHYQTDLETDSKPGSDGDSQSSGQADTIIGILDTGIWPESESFSDKTMGPVPSRWRGTCMESNDVDSFKCNRKLIGARYYNDSDAASAVPHTARDMIGHGTHVASTAAGNSLPDVSYYGLASGTAKGGSPGSRIAMYRVCTFFGCRGSSILAAFDDAISDGVDVLSLSLGSSAVFELEFSTDPIAIGAYHAVAKGITVVCSAGNDGPSPQTVVNIAPWILTVGATTIDRDFESDVVLGGNKVIKGEGINFANIKKSPAYPLIYGSSAKSNSSKVDDARNCKPNSLGEDKIKGRIVLCDNDDGEYTQTEKLEEVKRLGGVGLILIEDETRAVASRYGAFPLTVITSKDASEILSYINSTRNPVATILATVSVEQYKPAPAVAYFSSRGPSYATKNLLKPDIAAPGVNILAAWIGNDTAEAPAGKEPPLFNLLSGTSMACPHVSGIAATVKSQNPSWSPSAIRSAIMTTATQKNNLKAPITTHSGSVATPYDYGAGEVSPSGPLQPGLVYETDTADYLQFLCNHGYDISKIKLISPTLPDGFTCPKNANADLISNMNYPSIAISKFNGNESKKVSRTVTNVGSDDETQYTVSVSAAAGVDVKVIPDTLKFTKNSKKLSYQVIFSSNGSSSVKGAVFGSITWTNGKHKVRSPFVVSSD* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1285 768 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vvi18g1285 768 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Vvi18g1285 768 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Vvi18g1285 768 Pfam Peptidase inhibitor I9 32 106 IPR010259 -
Vvi18g1285 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 765 IPR045051 -
Vvi18g1285 768 Gene3D - 341 485 - -
Vvi18g1285 768 Gene3D - 632 767 - -
Vvi18g1285 768 Gene3D Peptidase S8/S53 domain 139 628 IPR036852 GO:0004252|GO:0006508
Vvi18g1285 768 Pfam Subtilase family 139 587 IPR000209 GO:0006508|GO:0008236
Vvi18g1285 768 FunFam Subtilisin-like protease SBT5.3 20 106 - -
Vvi18g1285 768 ProSitePatterns Serine proteases, subtilase family, histidine active site. 212 222 IPR022398 -
Vvi18g1285 768 FunFam subtilisin-like protease SBT1.5 341 484 - -
Vvi18g1285 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Vvi18g1285 768 CDD Peptidases_S8_3 103 582 IPR034197 -
Vvi18g1285 768 SUPERFAMILY Subtilisin-like 133 618 IPR036852 GO:0004252|GO:0006508
Vvi18g1285 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 106 IPR037045 -
Vvi18g1285 768 ProSiteProfiles Serine proteases, subtilase domain profile. 110 615 - -
Vvi18g1285 768 CDD PA_subtilisin_like 347 478 - -
Vvi18g1285 768 Pfam Fibronectin type-III domain 666 765 IPR041469 -
Vvi18g1285 768 FunFam Subtilisin-like protease SBT1.5 139 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1285 Vvi-Chr18 12908878 12912467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1285 32 767 Subtilisin-like Serine Gene Family AT1G20150 57.105 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1285 K25898 - vvi:100257482 1483.39