Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1190 ATGACACTGTTGCTTTTTGTCATTCTAGCTTTTCCTCTCTTTCTCTTGTTTCTTTATCGAAAACACAGAAAAAATGGAGGACTACTTCCACCAGGTCCTCCCGGCCTTCCCTTCATTGGAAACCTGCACCAGATGGATAACTCAGCCCCTCACCGCTACTTATGGCAACTCTCTAAACAATACGGGCCCCTCATGTCCTTGCGCCTCGGCTTCGTCCCCACCATAGTGGTTTCTTCCGCCAAAATAGCAAAGGAGGTCATGAAAACACAAGATCTTGAATTTGCTAGTAGGCCTTCCTTGATTGGCCAGCAAAGGCTATCTTACAACGGCCTAGATTTGGCCTTTTCACCATACAATGATTATTGGAGAGAAATGAGAAAGATTTGTGTTCTTCATCTCTTCACCTTGAAAAGGGTTAAATCCTATACTTCTATTCGGGAATATGAGGTTTCCCAAATGATTGAAAAAATTTCCAAGTTGGCATCTGCTTCCAAACTTATCAACTTGAGCGAGGCACTGATGTTTCTCACAAGCACCATAATCTGTAGGGTTGCTTTCGGGAAGAGGTACGAGGGTGAAGGATGTGAAAGAAGTAGATTTCATGGACTTCTAAATGATGCTCAGGCTATGTTGGGAAGCTTCTTTTTCTCTGATCATTTTCCGTTGATGGGTTGGCTTGATAAACTCACCGGCCTGACTGCCAGGCTCGAGAAAACTTTCAGGGAAATGGATTTGTTCTACCAGGAAATTATTGAAGAACATCTGAAACCAGACAGAAAAAAACAAGAACTAGAGGACATCACTGATGTCTTAATTGGACTGCGGAAGGATAACGACTTTGCCATTGATATCACTTGGGATCACATTAAAGGAGTGCTCATGAATATATTTCTAGGAGGAACAGATACAGGCGCAGCTACCGTGACTTGGGCGATGACAGCATTAATGAAGAATCCCAGAGTGATGAAGAAAGCCCAAGAAGAAGTGAGAAATACATTTGGGAAGAAGGGATTTATAGGGGAAGATGATGTTGAGAAGCTTCCTTATCTCAAGGCAGTAGTGAAGGAGACAATGAGGCTGCTTCCTTCAGTTCCATTGCTAGTTCCAAGAGAAACACTTCAGAAGTGCAGTTTAGATGGGTATGAGATCCCACCCAAAACCCTAGTGTTTGTGAATGCATGGGCCATTGGAAGAGATCCTGAGGCCTGGGAAAACCCAGAAGAGTTCATGCCGGAGAGATTCTTGGGTTCTTCCGTGGACTTCAGAGGACAGCATTATAAGCTGATACCATTCGGAGCAGGCCGAAGAGTTTGCCCAGGATTGCATATCGGAGTTGTGACAGTGGAGCTGACACTAGCTAATCTTCTTCACTCATTTGACTGGGAAATGCCTGCTGGAATGAACGAGGAAGACATAGACCTTGATACCATACCTGGTATTGCAATGCACAAGAAGAATGCTCTTTGCCTTGTGGCTAAGAAATATAATTAA 1491 0.438 MTLLLFVILAFPLFLLFLYRKHRKNGGLLPPGPPGLPFIGNLHQMDNSAPHRYLWQLSKQYGPLMSLRLGFVPTIVVSSAKIAKEVMKTQDLEFASRPSLIGQQRLSYNGLDLAFSPYNDYWREMRKICVLHLFTLKRVKSYTSIREYEVSQMIEKISKLASASKLINLSEALMFLTSTIICRVAFGKRYEGEGCERSRFHGLLNDAQAMLGSFFFSDHFPLMGWLDKLTGLTARLEKTFREMDLFYQEIIEEHLKPDRKKQELEDITDVLIGLRKDNDFAIDITWDHIKGVLMNIFLGGTDTGAATVTWAMTALMKNPRVMKKAQEEVRNTFGKKGFIGEDDVEKLPYLKAVVKETMRLLPSVPLLVPRETLQKCSLDGYEIPPKTLVFVNAWAIGRDPEAWENPEEFMPERFLGSSVDFRGQHYKLIPFGAGRRVCPGLHIGVVTVELTLANLLHSFDWEMPAGMNEEDIDLDTIPGIAMHKKNALCLVAKKYN* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1190 496 Gene3D Cytochrome P450 15 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Vvi18g1190 496 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PANTHER CYTOCHROME P450 71B11-RELATED 15 493 - -
Vvi18g1190 496 FunFam Cytochrome P450 83B1 17 491 - -
Vvi18g1190 496 CDD CYP71-like 60 488 - -
Vvi18g1190 496 Pfam Cytochrome P450 30 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1190 496 SUPERFAMILY Cytochrome P450 30 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g1190 Vvi-Chr18 11832431 11833989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g1190 1 495 Cytochrome P450 AT4G31500 49.197 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1190 - - vvi:100260959 983.4